Opened 11 years ago

Closed 11 years ago

Last modified 4 years ago

#7726 closed enhancement (fixed)

Upgrade biopython package to 1.53

Reported by: mhampton Owned by: tbd
Priority: minor Milestone: sage-4.3
Component: packages: optional Keywords: biopython
Cc: awebb Merged in:
Authors: Marshall Hampton Reviewers: Adam Webb
Report Upstream: N/A Work issues:
Branch: Commit:
Dependencies: Stopgaps:

Status badges

Description

Biopython was released December 15th, 2009. No major changes were made, so the new package just updates the source and SPKG.txt.

Change History (5)

comment:1 Changed 11 years ago by mhampton

  • Status changed from new to needs_review

New package available at: ​http://sage.math.washington.edu/home/mhampton/biopython-1.53.p0.spkg

comment:2 Changed 11 years ago by awebb

  • Status changed from needs_review to positive_review

The package installs and the check runs fine. I got a couple of warnings from the BioSQL test but that seems to be expected if I understand the code.

One small thing: The changes haven't been committed to the hg depository in the package. Otherwise, it looks good to me.

Adam

comment:3 Changed 11 years ago by mhampton

Thanks for the quick review. I commited the changes in hg, and removed a couple of .DS_Store files that my mac had added. This new package is up at the same link above.

comment:4 Changed 11 years ago by mhansen

  • Authors set to Marshall Hamption
  • Resolution set to fixed
  • Reviewers changed from awebb to Adam Webb
  • Status changed from positive_review to closed

comment:5 Changed 4 years ago by chapoton

  • Authors changed from Marshall Hamption to Marshall Hampton

wrong name

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