Opened 11 years ago

Closed 10 years ago

Last modified 10 years ago

#3391 closed defect (fixed)

[with spkg, positive review] update scipy to 0.7

Reported by: mabshoff Owned by: mabshoff
Priority: major Milestone: sage-4.0.2
Component: packages: standard Keywords:
Cc: jason, jkantor Merged in: 4.0.2.alpha0
Authors: Jason Grout Reviewers: Josh Kantor
Report Upstream: Work issues:
Branch: Commit:
Dependencies: Stopgaps:

Description (last modified by jason)

An spkg for this is at http://sage.math.washington.edu/home/jason/scipy-0.7.spkg

The patch below should be applied too.

Attachments (1)

scipy-0.7-update.patch (5.8 KB) - added by jason 10 years ago.

Download all attachments as: .zip

Change History (18)

comment:1 Changed 11 years ago by robertwb

See if this fixes the issue at #2303 and re-enable the option if so. (Though perhaps with a rewrite to remove the exessive string processing...)

comment:2 Changed 11 years ago by mabshoff

  • Cc jason jkantor added
  • Summary changed from update scipy to match the numpy 1.1.0 release to update scipy to match the numpy 1.2.0 release

This is now the 1.2.0 numpy release once we merge #4200. We do need this since otherwise we get a boadload of deprecation warnings.

Cheers,

Michael

comment:3 Changed 11 years ago by jason

  • Summary changed from update scipy to match the numpy 1.2.0 release to [with spkg, needs review] update scipy to match the numpy 1.2.0 release

Updated spkg at http://sage.math.washington.edu/home/jason/scipy-20080927-0.6.spkg

I have successfully installed it. I haven't run doctests yet.

comment:5 Changed 11 years ago by mabshoff

  • Summary changed from [with spkg, needs review] update scipy to match the numpy 1.2.0 release to [with spkg, positive review] update scipy 0.7svn to match the numpy 1.2.0 release

I fixed a couple tiny issues and

http://sage.math.washington.edu/home/mabshoff/release-cycles-3.1.3/alpha2/scipy-0.7r4752svn.spkg

is the latest version. Positive review.

Cheers,

Michael

comment:6 Changed 11 years ago by mabshoff

We have to fix some deprecation warning, but that will be fixed via #4205.

Cheers,

Michael

comment:7 Changed 11 years ago by mabshoff

  • Resolution set to fixed
  • Status changed from new to closed

Merged in Sage 3.1.3.alpha2

comment:8 Changed 11 years ago by mabshoff

  • Resolution fixed deleted
  • Status changed from closed to reopened
  • Summary changed from [with spkg, positive review] update scipy 0.7svn to match the numpy 1.2.0 release to [with spkg, needs work] update scipy 0.7svn to match the numpy 1.2.0 release

Due to some trouble with deprecation and other bad, bad things reopen this for now. We will deal with the fallout post Sage 3.1.3. For some details about the trouble see #4205 and #4210.

Cheers,

Michael

comment:9 Changed 11 years ago by mabshoff

  • Description modified (diff)

comment:10 Changed 10 years ago by mabshoff

  • Summary changed from [with spkg, needs work] update scipy 0.7svn to match the numpy 1.2.0 release to [with spkg, needs work] update scipy 0.7 to match the numpy 1.2.1 update.

Note that there are various tickets which will can be resolved at the same time as the update.

Cheers,

Michael

comment:11 Changed 10 years ago by jason

A new spkg for scipy 0.7.0 is here: http://sage.math.washington.edu/home/jason/scipy-0.7.spkg

I'm attaching a patch which fixes many of the errors and deprecations. There are a few other errors I am inquiring on the scipy mailing list about.

Changed 10 years ago by jason

comment:12 Changed 10 years ago by jason

  • Description modified (diff)
  • Summary changed from [with spkg, needs work] update scipy 0.7 to match the numpy 1.2.1 update. to [with spkg, needs review] update scipy to 0.7

comment:13 Changed 10 years ago by jason

#4205 can likely be closed once this ticket is closed. See also #6140 for the numpy update.

comment:14 Changed 10 years ago by jkantor

  • Summary changed from [with spkg, needs review] update scipy to 0.7 to [with spkg, positive review] update scipy to 0.7

Looks good, positive review.

comment:15 Changed 10 years ago by jason

  • Authors set to Jason Grout

comment:16 Changed 10 years ago by craigcitro

  • Resolution set to fixed
  • Reviewers set to Josh Kantor
  • Status changed from reopened to closed

spkg and patch merged in 4.0.2.alpha0.

comment:17 Changed 10 years ago by craigcitro

  • Merged in set to 4.0.2.alpha0

Oops, forgot a field.

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