Opened 9 years ago
Closed 9 years ago
#12065 closed defect (duplicate)
Failing doctest - R installation broken?
Reported by: | flint | Owned by: | tbd |
---|---|---|---|
Priority: | major | Milestone: | sage-duplicate/invalid/wontfix |
Component: | packages: standard | Keywords: | R, lattice, r-project |
Cc: | burcin | Merged in: | |
Authors: | Reviewers: | Burcin Erocal, Volker Braun | |
Report Upstream: | N/A | Work issues: | |
Branch: | Commit: | ||
Dependencies: | #12057 | Stopgaps: |
Description
I'm working with Sage 4.7.2 under Linux 2.6.39-gentoo-[changeset:3 r3]. When I run the doctest
./sage -t devel/sage-main/sage/interfaces/r.py
I obtain the following error message:
sage -t "devel/sage-main/sage/interfaces/r.py"
File "/home/flint/sage-4.7.2/devel/sage-main/sage/interfaces/r.py", line 997:
sage: r.library("lattice")
Exception raised:
Traceback (most recent call last):
File "/home/flint/sage-4.7.2/local/bin/ncadoctest.py", line 1231, in run_one_test
self.run_one_example(test, example, filename, compileflags)
File "/home/flint/sage-4.7.2/local/bin/sagedoctest.py", line 38, in run_one_example
OrigDocTestRunner.run_one_example(self, test, example, filename, compileflags)
File "/home/flint/sage-4.7.2/local/bin/ncadoctest.py", line 1172, in run_one_example
compileflags, 1) in test.globs
File "<doctest __main__.example_37![7]>", line 1, in <module>
r.library("lattice")###line 997:
sage: r.library("lattice")
File "/home/flint/sage-4.7.2/local/lib/python/site-packages/sage/interfaces/r.py", line 572, in library
raise ImportError, "%s"%ret
ImportError: Loading required package: lattice
Warning message:
In library(package, lib.loc = lib.loc, character.only = TRUE, logical.return = TRUE, :
there is no package called 'lattice'
1 items had failures:
1 of 9 in __main__.example_37
*Test Failed* 1 failures.
For whitespace errors, see the file /home/flint/.sagetmp/r_3534.py
[3.4 s]
----------------------------------------------------------------------
The following tests failed:
sage -t "devel/sage-main/sage/interfaces/r.py"
Total time for all tests: 3.4 seconds
Change History (8)
comment:1 follow-up: ↓ 3 Changed 9 years ago by
- Keywords r-project added
comment:2 Changed 9 years ago by
- Cc burcin added
- Type changed from PLEASE CHANGE to defect
comment:3 in reply to: ↑ 1 ; follow-up: ↓ 4 Changed 9 years ago by
Thank you. This fixed my problem.
comment:4 in reply to: ↑ 3 Changed 9 years ago by
comment:5 Changed 9 years ago by
- Dependencies set to 12057
- Status changed from new to needs_review
Fixed by #12057
comment:6 Changed 9 years ago by
- Reviewers set to Burcin Erocal
- Status changed from needs_review to positive_review
comment:7 Changed 9 years ago by
- Dependencies changed from 12057 to #12057
- Milestone changed from sage-4.8 to sage-duplicate/invalid/wontfix
- Reviewers changed from Burcin Erocal to Burcin Erocal, Volker Braun
comment:8 Changed 9 years ago by
- Resolution set to duplicate
- Status changed from positive_review to closed
Can you try #12057 ?