Ticket #9808: probable-Numpy-SciPy-issues-on-OpenSolaris.txt

File probable-Numpy-SciPy-issues-on-OpenSolaris.txt, 18.7 KB (added by drkirkby, 11 years ago)

The three new doctest failures which are almost certainly a result of upgrading Numpy and Scipy

Line 
1Script started on October  6, 2010 06:31:43 PM BST
2drkirkby@hawk:~/sage-4.6.alpha2$ ./sage -t  -long devel/sage/doc/en/bordeaux_2008/introduction.rst
3sage -t -long "devel/sage/doc/en/bordeaux_2008/introduction.rst"
4**********************************************************************
5File "/export/home/drkirkby/sage-4.6.alpha2/devel/sage/doc/en/bordeaux_2008/introduction.rst", line 74:
6    sage: list_plot3d(v, interpolation_type='nn')
7Exception raised:
8    Traceback (most recent call last):
9      File "/export/home/drkirkby/sage-4.6.alpha2/local/bin/ncadoctest.py", line 1231, in run_one_test
10        self.run_one_example(test, example, filename, compileflags)
11      File "/export/home/drkirkby/sage-4.6.alpha2/local/bin/sagedoctest.py", line 38, in run_one_example
12        OrigDocTestRunner.run_one_example(self, test, example, filename, compileflags)
13      File "/export/home/drkirkby/sage-4.6.alpha2/local/bin/ncadoctest.py", line 1172, in run_one_example
14        compileflags, 1) in test.globs
15      File "<doctest __main__.example_2[3]>", line 1, in <module>
16        list_plot3d(v, interpolation_type='nn')###line 74:
17    sage: list_plot3d(v, interpolation_type='nn')
18      File "/export/home/drkirkby/sage-4.6.alpha2/local/lib/python/site-packages/sage/plot/plot3d/list_plot3d.py", line 193, in list_plot3d
19        return list_plot3d_array_of_arrays(v, interpolation_type,texture, **kwds)
20      File "/export/home/drkirkby/sage-4.6.alpha2/local/lib/python/site-packages/sage/plot/plot3d/list_plot3d.py", line 205, in list_plot3d_array_of_arrays
21        G = list_plot3d(m,interpolation_type,texture, **kwds)
22      File "/export/home/drkirkby/sage-4.6.alpha2/local/lib/python/site-packages/sage/plot/plot3d/list_plot3d.py", line 172, in list_plot3d
23        return list_plot3d_tuples(l,interpolation_type,texture,**kwds)
24      File "/export/home/drkirkby/sage-4.6.alpha2/local/lib/python/site-packages/sage/plot/plot3d/list_plot3d.py", line 210, in list_plot3d_tuples
25        import delaunay
26    ImportError: No module named delaunay
27**********************************************************************
281 items had failures:
29   1 of   4 in __main__.example_2
30***Test Failed*** 1 failures.
31For whitespace errors, see the file /export/home/drkirkby/.sage//tmp/.doctest_introduction.py
32         [2.4 s]
33 
34----------------------------------------------------------------------
35The following tests failed:
36
37
38        sage -t -long "devel/sage/doc/en/bordeaux_2008/introduction.rst"
39Total time for all tests: 2.4 seconds
40drkirkby@hawk:~/sage-4.6.alpha2$ ./sage -t  -long devel/sage/sage/numerical/test.py
41sage -t -long "devel/sage/sage/numerical/test.py"           
42**********************************************************************
43File "/export/home/drkirkby/sage-4.6.alpha2/devel/sage/sage/numerical/test.py", line 12:
44    sage: import arpack
45Exception raised:
46    Traceback (most recent call last):
47      File "/export/home/drkirkby/sage-4.6.alpha2/local/bin/ncadoctest.py", line 1231, in run_one_test
48        self.run_one_example(test, example, filename, compileflags)
49      File "/export/home/drkirkby/sage-4.6.alpha2/local/bin/sagedoctest.py", line 38, in run_one_example
50        OrigDocTestRunner.run_one_example(self, test, example, filename, compileflags)
51      File "/export/home/drkirkby/sage-4.6.alpha2/local/bin/ncadoctest.py", line 1172, in run_one_example
52        compileflags, 1) in test.globs
53      File "<doctest __main__.example_0[10]>", line 1, in <module>
54        import arpack###line 12:
55    sage: import arpack
56    ImportError: No module named arpack
57**********************************************************************
58File "/export/home/drkirkby/sage-4.6.alpha2/devel/sage/sage/numerical/test.py", line 27:
59    sage: e,v=arpack.speigs.ARPACK_eigs(A.matvec,500,6,which='SM')
60Exception raised:
61    Traceback (most recent call last):
62      File "/export/home/drkirkby/sage-4.6.alpha2/local/bin/ncadoctest.py", line 1231, in run_one_test
63        self.run_one_example(test, example, filename, compileflags)
64      File "/export/home/drkirkby/sage-4.6.alpha2/local/bin/sagedoctest.py", line 38, in run_one_example
65        OrigDocTestRunner.run_one_example(self, test, example, filename, compileflags)
66      File "/export/home/drkirkby/sage-4.6.alpha2/local/bin/ncadoctest.py", line 1172, in run_one_example
67        compileflags, 1) in test.globs
68      File "<doctest __main__.example_0[19]>", line 1, in <module>
69        e,v=arpack.speigs.ARPACK_eigs(A.matvec,Integer(500),Integer(6),which='SM')###line 27:
70    sage: e,v=arpack.speigs.ARPACK_eigs(A.matvec,500,6,which='SM')
71    NameError: name 'arpack' is not defined
72**********************************************************************
73File "/export/home/drkirkby/sage-4.6.alpha2/devel/sage/sage/numerical/test.py", line 28:
74    sage: e[0]*float(501/pi)**2
75Exception raised:
76    Traceback (most recent call last):
77      File "/export/home/drkirkby/sage-4.6.alpha2/local/bin/ncadoctest.py", line 1231, in run_one_test
78        self.run_one_example(test, example, filename, compileflags)
79      File "/export/home/drkirkby/sage-4.6.alpha2/local/bin/sagedoctest.py", line 38, in run_one_example
80        OrigDocTestRunner.run_one_example(self, test, example, filename, compileflags)
81      File "/export/home/drkirkby/sage-4.6.alpha2/local/bin/ncadoctest.py", line 1172, in run_one_example
82        compileflags, 1) in test.globs
83      File "<doctest __main__.example_0[20]>", line 1, in <module>
84        e[Integer(0)]*float(Integer(501)/pi)**Integer(2)###line 28:
85    sage: e[0]*float(501/pi)**2
86    TypeError: 'sage.symbolic.constants_c.E' object does not support indexing
87**********************************************************************
881 items had failures:
89   3 of  21 in __main__.example_0
90***Test Failed*** 3 failures.
91For whitespace errors, see the file /export/home/drkirkby/.sage//tmp/.doctest_test.py
92         [2.2 s]
93 
94----------------------------------------------------------------------
95The following tests failed:
96
97
98        sage -t -long "devel/sage/sage/numerical/test.py"
99Total time for all tests: 2.2 seconds
100drkirkby@hawk:~/sage-4.6.alpha2$ ./sage -t  -long devel/sage/sage/plot/plot3d/list_plot3d.py
101sage -t -long "devel/sage/sage/plot/plot3d/list_plot3d.py" 
102**********************************************************************
103File "/export/home/drkirkby/sage-4.6.alpha2/devel/sage/sage/plot/plot3d/list_plot3d.py", line 90:
104    sage: list_plot3d(m, texture='yellow', interpolation_type='nn',frame_aspect_ratio=[1,1,1/3])
105Exception raised:
106    Traceback (most recent call last):
107      File "/export/home/drkirkby/sage-4.6.alpha2/local/bin/ncadoctest.py", line 1231, in run_one_test
108        self.run_one_example(test, example, filename, compileflags)
109      File "/export/home/drkirkby/sage-4.6.alpha2/local/bin/sagedoctest.py", line 38, in run_one_example
110        OrigDocTestRunner.run_one_example(self, test, example, filename, compileflags)
111      File "/export/home/drkirkby/sage-4.6.alpha2/local/bin/ncadoctest.py", line 1172, in run_one_example
112        compileflags, 1) in test.globs
113      File "<doctest __main__.example_1[7]>", line 1, in <module>
114        list_plot3d(m, texture='yellow', interpolation_type='nn',frame_aspect_ratio=[Integer(1),Integer(1),Integer(1)/Integer(3)])###line 90:
115    sage: list_plot3d(m, texture='yellow', interpolation_type='nn',frame_aspect_ratio=[1,1,1/3])
116      File "/export/home/drkirkby/sage-4.6.alpha2/local/lib/python/site-packages/sage/plot/plot3d/list_plot3d.py", line 172, in list_plot3d
117        return list_plot3d_tuples(l,interpolation_type,texture,**kwds)
118      File "/export/home/drkirkby/sage-4.6.alpha2/local/lib/python/site-packages/sage/plot/plot3d/list_plot3d.py", line 210, in list_plot3d_tuples
119        import delaunay
120    ImportError: No module named delaunay
121**********************************************************************
122File "/export/home/drkirkby/sage-4.6.alpha2/devel/sage/sage/plot/plot3d/list_plot3d.py", line 96:
123    sage: list_plot3d(m, texture='yellow', interpolation_type='nn',frame_aspect_ratio=[1,1,1/3],num_points=40)
124Exception raised:
125    Traceback (most recent call last):
126      File "/export/home/drkirkby/sage-4.6.alpha2/local/bin/ncadoctest.py", line 1231, in run_one_test
127        self.run_one_example(test, example, filename, compileflags)
128      File "/export/home/drkirkby/sage-4.6.alpha2/local/bin/sagedoctest.py", line 38, in run_one_example
129        OrigDocTestRunner.run_one_example(self, test, example, filename, compileflags)
130      File "/export/home/drkirkby/sage-4.6.alpha2/local/bin/ncadoctest.py", line 1172, in run_one_example
131        compileflags, 1) in test.globs
132      File "<doctest __main__.example_1[8]>", line 1, in <module>
133        list_plot3d(m, texture='yellow', interpolation_type='nn',frame_aspect_ratio=[Integer(1),Integer(1),Integer(1)/Integer(3)],num_points=Integer(40))###line 96:
134    sage: list_plot3d(m, texture='yellow', interpolation_type='nn',frame_aspect_ratio=[1,1,1/3],num_points=40)
135      File "/export/home/drkirkby/sage-4.6.alpha2/local/lib/python/site-packages/sage/plot/plot3d/list_plot3d.py", line 172, in list_plot3d
136        return list_plot3d_tuples(l,interpolation_type,texture,**kwds)
137      File "/export/home/drkirkby/sage-4.6.alpha2/local/lib/python/site-packages/sage/plot/plot3d/list_plot3d.py", line 210, in list_plot3d_tuples
138        import delaunay
139    ImportError: No module named delaunay
140**********************************************************************
141File "/export/home/drkirkby/sage-4.6.alpha2/devel/sage/sage/plot/plot3d/list_plot3d.py", line 102:
142    sage: list_plot3d(m, texture='yellow', interpolation_type='spline',frame_aspect_ratio=[1,1,1/3])
143Exception raised:
144    Traceback (most recent call last):
145      File "/export/home/drkirkby/sage-4.6.alpha2/local/bin/ncadoctest.py", line 1231, in run_one_test
146        self.run_one_example(test, example, filename, compileflags)
147      File "/export/home/drkirkby/sage-4.6.alpha2/local/bin/sagedoctest.py", line 38, in run_one_example
148        OrigDocTestRunner.run_one_example(self, test, example, filename, compileflags)
149      File "/export/home/drkirkby/sage-4.6.alpha2/local/bin/ncadoctest.py", line 1172, in run_one_example
150        compileflags, 1) in test.globs
151      File "<doctest __main__.example_1[9]>", line 1, in <module>
152        list_plot3d(m, texture='yellow', interpolation_type='spline',frame_aspect_ratio=[Integer(1),Integer(1),Integer(1)/Integer(3)])###line 102:
153    sage: list_plot3d(m, texture='yellow', interpolation_type='spline',frame_aspect_ratio=[1,1,1/3])
154      File "/export/home/drkirkby/sage-4.6.alpha2/local/lib/python/site-packages/sage/plot/plot3d/list_plot3d.py", line 172, in list_plot3d
155        return list_plot3d_tuples(l,interpolation_type,texture,**kwds)
156      File "/export/home/drkirkby/sage-4.6.alpha2/local/lib/python/site-packages/sage/plot/plot3d/list_plot3d.py", line 210, in list_plot3d_tuples
157        import delaunay
158    ImportError: No module named delaunay
159**********************************************************************
160File "/export/home/drkirkby/sage-4.6.alpha2/devel/sage/sage/plot/plot3d/list_plot3d.py", line 109:
161    sage: list_plot3d(m, texture='yellow', interpolation_type='spline', degree=5, frame_aspect_ratio=[1,1,1/3])
162Exception raised:
163    Traceback (most recent call last):
164      File "/export/home/drkirkby/sage-4.6.alpha2/local/bin/ncadoctest.py", line 1231, in run_one_test
165        self.run_one_example(test, example, filename, compileflags)
166      File "/export/home/drkirkby/sage-4.6.alpha2/local/bin/sagedoctest.py", line 38, in run_one_example
167        OrigDocTestRunner.run_one_example(self, test, example, filename, compileflags)
168      File "/export/home/drkirkby/sage-4.6.alpha2/local/bin/ncadoctest.py", line 1172, in run_one_example
169        compileflags, 1) in test.globs
170      File "<doctest __main__.example_1[10]>", line 1, in <module>
171        list_plot3d(m, texture='yellow', interpolation_type='spline', degree=Integer(5), frame_aspect_ratio=[Integer(1),Integer(1),Integer(1)/Integer(3)])###line 109:
172    sage: list_plot3d(m, texture='yellow', interpolation_type='spline', degree=5, frame_aspect_ratio=[1,1,1/3])
173      File "/export/home/drkirkby/sage-4.6.alpha2/local/lib/python/site-packages/sage/plot/plot3d/list_plot3d.py", line 172, in list_plot3d
174        return list_plot3d_tuples(l,interpolation_type,texture,**kwds)
175      File "/export/home/drkirkby/sage-4.6.alpha2/local/lib/python/site-packages/sage/plot/plot3d/list_plot3d.py", line 210, in list_plot3d_tuples
176        import delaunay
177    ImportError: No module named delaunay
178**********************************************************************
179File "/export/home/drkirkby/sage-4.6.alpha2/devel/sage/sage/plot/plot3d/list_plot3d.py", line 125:
180    sage: list_plot3d(l,texture='yellow')
181Exception raised:
182    Traceback (most recent call last):
183      File "/export/home/drkirkby/sage-4.6.alpha2/local/bin/ncadoctest.py", line 1231, in run_one_test
184        self.run_one_example(test, example, filename, compileflags)
185      File "/export/home/drkirkby/sage-4.6.alpha2/local/bin/sagedoctest.py", line 38, in run_one_example
186        OrigDocTestRunner.run_one_example(self, test, example, filename, compileflags)
187      File "/export/home/drkirkby/sage-4.6.alpha2/local/bin/ncadoctest.py", line 1172, in run_one_example
188        compileflags, 1) in test.globs
189      File "<doctest __main__.example_1[14]>", line 1, in <module>
190        list_plot3d(l,texture='yellow')###line 125:
191    sage: list_plot3d(l,texture='yellow')
192      File "/export/home/drkirkby/sage-4.6.alpha2/local/lib/python/site-packages/sage/plot/plot3d/list_plot3d.py", line 191, in list_plot3d
193        return list_plot3d_tuples(v,interpolation_type,texture=texture, **kwds)
194      File "/export/home/drkirkby/sage-4.6.alpha2/local/lib/python/site-packages/sage/plot/plot3d/list_plot3d.py", line 210, in list_plot3d_tuples
195        import delaunay
196    ImportError: No module named delaunay
197**********************************************************************
198File "/export/home/drkirkby/sage-4.6.alpha2/devel/sage/sage/plot/plot3d/list_plot3d.py", line 135:
199    sage: list_plot3d(l,interpolation_type='nn',texture='yellow',num_points=100)
200Exception raised:
201    Traceback (most recent call last):
202      File "/export/home/drkirkby/sage-4.6.alpha2/local/bin/ncadoctest.py", line 1231, in run_one_test
203        self.run_one_example(test, example, filename, compileflags)
204      File "/export/home/drkirkby/sage-4.6.alpha2/local/bin/sagedoctest.py", line 38, in run_one_example
205        OrigDocTestRunner.run_one_example(self, test, example, filename, compileflags)
206      File "/export/home/drkirkby/sage-4.6.alpha2/local/bin/ncadoctest.py", line 1172, in run_one_example
207        compileflags, 1) in test.globs
208      File "<doctest __main__.example_1[17]>", line 1, in <module>
209        list_plot3d(l,interpolation_type='nn',texture='yellow',num_points=Integer(100))###line 135:
210    sage: list_plot3d(l,interpolation_type='nn',texture='yellow',num_points=100)
211      File "/export/home/drkirkby/sage-4.6.alpha2/local/lib/python/site-packages/sage/plot/plot3d/list_plot3d.py", line 191, in list_plot3d
212        return list_plot3d_tuples(v,interpolation_type,texture=texture, **kwds)
213      File "/export/home/drkirkby/sage-4.6.alpha2/local/lib/python/site-packages/sage/plot/plot3d/list_plot3d.py", line 210, in list_plot3d_tuples
214        import delaunay
215    ImportError: No module named delaunay
216**********************************************************************
217File "/export/home/drkirkby/sage-4.6.alpha2/devel/sage/sage/plot/plot3d/list_plot3d.py", line 148:
218    sage: show(list_plot3d(pts, interpolation_type='nn'))
219Expected:
220    Traceback (most recent call last):
221    ...
222    ValueError: Two points with same x,y coordinates and different z coordinates were given. Interpolation cannot handle this.
223Got:
224    Traceback (most recent call last):
225      File "/export/home/drkirkby/sage-4.6.alpha2/local/bin/ncadoctest.py", line 1231, in run_one_test
226        self.run_one_example(test, example, filename, compileflags)
227      File "/export/home/drkirkby/sage-4.6.alpha2/local/bin/sagedoctest.py", line 38, in run_one_example
228        OrigDocTestRunner.run_one_example(self, test, example, filename, compileflags)
229      File "/export/home/drkirkby/sage-4.6.alpha2/local/bin/ncadoctest.py", line 1172, in run_one_example
230        compileflags, 1) in test.globs
231      File "<doctest __main__.example_1[22]>", line 1, in <module>
232        show(list_plot3d(pts, interpolation_type='nn'))###line 148:
233    sage: show(list_plot3d(pts, interpolation_type='nn'))
234      File "/export/home/drkirkby/sage-4.6.alpha2/local/lib/python/site-packages/sage/plot/plot3d/list_plot3d.py", line 191, in list_plot3d
235        return list_plot3d_tuples(v,interpolation_type,texture=texture, **kwds)
236      File "/export/home/drkirkby/sage-4.6.alpha2/local/lib/python/site-packages/sage/plot/plot3d/list_plot3d.py", line 210, in list_plot3d_tuples
237        import delaunay
238    ImportError: No module named delaunay
239**********************************************************************
240File "/export/home/drkirkby/sage-4.6.alpha2/devel/sage/sage/plot/plot3d/list_plot3d.py", line 156:
241    sage: show(list_plot3d(mat,interpolation_type='nn'))
242Expected:
243    Traceback (most recent call last):
244    ...
245    ValueError: We need at least 3 points to perform the interpolation
246Got:
247    Traceback (most recent call last):
248      File "/export/home/drkirkby/sage-4.6.alpha2/local/bin/ncadoctest.py", line 1231, in run_one_test
249        self.run_one_example(test, example, filename, compileflags)
250      File "/export/home/drkirkby/sage-4.6.alpha2/local/bin/sagedoctest.py", line 38, in run_one_example
251        OrigDocTestRunner.run_one_example(self, test, example, filename, compileflags)
252      File "/export/home/drkirkby/sage-4.6.alpha2/local/bin/ncadoctest.py", line 1172, in run_one_example
253        compileflags, 1) in test.globs
254      File "<doctest __main__.example_1[24]>", line 1, in <module>
255        show(list_plot3d(mat,interpolation_type='nn'))###line 156:
256    sage: show(list_plot3d(mat,interpolation_type='nn'))
257      File "/export/home/drkirkby/sage-4.6.alpha2/local/lib/python/site-packages/sage/plot/plot3d/list_plot3d.py", line 172, in list_plot3d
258        return list_plot3d_tuples(l,interpolation_type,texture,**kwds)
259      File "/export/home/drkirkby/sage-4.6.alpha2/local/lib/python/site-packages/sage/plot/plot3d/list_plot3d.py", line 210, in list_plot3d_tuples
260        import delaunay
261    ImportError: No module named delaunay
262**********************************************************************
2631 items had failures:
264   8 of  25 in __main__.example_1
265***Test Failed*** 8 failures.
266For whitespace errors, see the file /export/home/drkirkby/.sage//tmp/.doctest_list_plot3d.py
267         [2.4 s]
268 
269----------------------------------------------------------------------
270The following tests failed:
271
272
273        sage -t -long "devel/sage/sage/plot/plot3d/list_plot3d.py"
274Total time for all tests: 2.4 seconds
275drkirkby@hawk:~/sage-4.6.alpha2$ exit
276exit
277
278script done on October  6, 2010 06:33:26 PM BST