Ticket #26856: gap_packages-4.10.0.log

File gap_packages-4.10.0.log, 79.4 KB (added by mantepse, 3 years ago)
Line 
1Found local metadata for gap_packages-4.10.0
2Using cached file /home/martin/sage-develop/upstream/gap-4.10.0.tar.gz
3gap_packages-4.10.0
4====================================================
5Setting up build directory for gap_packages-4.10.0
6Finished extraction
7Applying patches from ../patches...
8Applying ../patches/cohomolo.patch
9patching file pkg/cohomolo-1.6.7/Makefile.in
10patching file pkg/cohomolo-1.6.7/standalone/progs.d/findpres/makefile
11patching file pkg/cohomolo-1.6.7/standalone/progs.d/makefile
12patching file pkg/cohomolo-1.6.7/standalone/progs.d/makefile.gap
13Applying ../patches/guava.patch
14patching file pkg/guava-3.14/Makefile.in
15patching file pkg/guava-3.14/src/leon/Makefile
16patching file pkg/guava-3.14/src/leon/Makefile.in
17****************************************************
18Host system:
19Linux Martin-Laptop 4.13.0-46-generic #51-Ubuntu SMP Tue Jun 12 12:36:29 UTC 2018 x86_64 x86_64 x86_64 GNU/Linux
20****************************************************
21C compiler: gcc
22C compiler version:
23Using built-in specs.
24COLLECT_GCC=gcc
25COLLECT_LTO_WRAPPER=/home/martin/sage-develop/local/libexec/gcc/x86_64-pc-linux-gnu/7.2.0/lto-wrapper
26Target: x86_64-pc-linux-gnu
27Configured with: ../src/configure --prefix=/home/martin/sage-develop/local --with-local-prefix=/home/martin/sage-develop/local --with-gmp=/home/martin/sage-develop/local --with-mpfr=/home/martin/sage-develop/local --with-mpc=/home/martin/sage-develop/local --with-system-zlib --disable-multilib --disable-nls --enable-languages=c,c++,fortran --disable-libitm 
28Thread model: posix
29gcc version 7.2.0 (GCC)
30****************************************************
31Warning: No files to uninstall for 'gap_packages'
32Uninstalling existing 'gap_packages'
33aclib-1.3.1 -> /home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/inst/home/martin/sage-develop/local/share/gap/pkg
34AutoDoc-2018.09.20 -> /home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/inst/home/martin/sage-develop/local/share/gap/pkg
35corelg -> /home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/inst/home/martin/sage-develop/local/share/gap/pkg
36crime-1.5 -> /home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/inst/home/martin/sage-develop/local/share/gap/pkg
37cryst -> /home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/inst/home/martin/sage-develop/local/share/gap/pkg
38crystcat -> /home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/inst/home/martin/sage-develop/local/share/gap/pkg
39design -> /home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/inst/home/martin/sage-develop/local/share/gap/pkg
40gbnp -> /home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/inst/home/martin/sage-develop/local/share/gap/pkg
41Hap1.15 -> /home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/inst/home/martin/sage-develop/local/share/gap/pkg
42HAPcryst -> /home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/inst/home/martin/sage-develop/local/share/gap/pkg
43hecke-1.5 -> /home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/inst/home/martin/sage-develop/local/share/gap/pkg
44liealgdb-2.2 -> /home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/inst/home/martin/sage-develop/local/share/gap/pkg
45liepring-1.9.2 -> /home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/inst/home/martin/sage-develop/local/share/gap/pkg
46liering -> /home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/inst/home/martin/sage-develop/local/share/gap/pkg
47loops -> /home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/inst/home/martin/sage-develop/local/share/gap/pkg
48MapClass-1.4.3 -> /home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/inst/home/martin/sage-develop/local/share/gap/pkg
49polymaking -> /home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/inst/home/martin/sage-develop/local/share/gap/pkg
50qpa-version-1.29 -> /home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/inst/home/martin/sage-develop/local/share/gap/pkg
51quagroup -> /home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/inst/home/martin/sage-develop/local/share/gap/pkg
52radiroot-2.8 -> /home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/inst/home/martin/sage-develop/local/share/gap/pkg
53repsn -> /home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/inst/home/martin/sage-develop/local/share/gap/pkg
54sla -> /home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/inst/home/martin/sage-develop/local/share/gap/pkg
55sonata-2.9.1 -> /home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/inst/home/martin/sage-develop/local/share/gap/pkg
56Toric-1.9.4 -> /home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/inst/home/martin/sage-develop/local/share/gap/pkg
57utils-0.59 -> /home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/inst/home/martin/sage-develop/local/share/gap/pkg
58Building GAP package cohomolo-1.6.7
59Building gap_packages-4.10.0
60make[4]: Entering directory '/home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/src/pkg/cohomolo-1.6.7'
61make[4]: warning: -jN forced in submake: disabling jobserver mode.
62mkdir -p bin/x86_64-pc-linux-gnu-default64;
63cd standalone/progs.d;\
64make CC="gcc" BIN="..//..//bin/x86_64-pc-linux-gnu-default64" COPTS=""
65make[5]: Entering directory '/home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/src/pkg/cohomolo-1.6.7/standalone/progs.d'
66gcc -c -O -fno-builtin gpd.c
67gpd.c: In function 'main':
68gpd.c:37:7: warning: implicit declaration of function 'gpprog' [-Wimplicit-function-declaration]
69   if (gpprog()== -1) exit(1);
70       ^~~~~~
71gcc -c -O -fno-builtin gpp.c
72gcc -c -O -fno-builtin permfns.c
73gcc -O -fno-builtin -o ..//..//bin/x86_64-pc-linux-gnu-default64/gprun gpd.o gpp.o permfns.o
74gcc -c -O -fno-builtin egd.c
75egd.c: In function 'main':
76egd.c:31:7: warning: implicit declaration of function 'egprog' [-Wimplicit-function-declaration]
77   if (egprog()== -1) exit(1);
78       ^~~~~~
79gcc -c -O -fno-builtin egp.c
80gcc -O -fno-builtin -o ..//..//bin/x86_64-pc-linux-gnu-default64/egrun egd.o egp.o permfns.o
81gcc -c -O -fno-builtin syld.c
82syld.c: In function 'main':
83syld.c:31:7: warning: implicit declaration of function 'sylprog' [-Wimplicit-function-declaration]
84   if (sylprog()== -1) exit(1);
85       ^~~~~~~
86gcc -c -O -fno-builtin sylp.c
87sylp.c: In function 'sylprog':
88sylp.c:90:33: warning: implicit declaration of function 'exprep'; did you mean 'execlp'? [-Wimplicit-function-declaration]
89     { k++; expptr[k]=z; z+=npt; exprep(j,k,svgptr[i]); }
90                                 ^~~~~~
91                                 execlp
92sylp.c:117:9: warning: implicit declaration of function 'allorbs'; did you mean 'llabs'? [-Wimplicit-function-declaration]
93       { allorbs(lporb,orno); bt=0;
94         ^~~~~~~
95         llabs
96sylp.c:149:18: warning: implicit declaration of function 'expimage'; did you mean 'image'? [-Wimplicit-function-declaration]
97             { im=expimage(base[adno]); l=orno[im];
98                  ^~~~~~~~
99                  image
100sylp.c:166:28: warning: implicit declaration of function 'ppower'; did you mean 'popen'? [-Wimplicit-function-declaration]
101             if (k==adno && ppower(ct)==0) {ok=0;break;}
102                            ^~~~~~
103                            popen
104sylp.c:172:19: warning: implicit declaration of function 'deforbperm'; did you mean 'readperm'? [-Wimplicit-function-declaration]
105             bt=0; deforbperm();
106                   ^~~~~~~~~~
107                   readperm
108gcc -c -O -fno-builtin morepermfns.c
109gcc -O -fno-builtin -o ..//..//bin/x86_64-pc-linux-gnu-default64/sylrun syld.o sylp.o morepermfns.o permfns.o
110gcc -c -O -fno-builtin normd.c
111normd.c: In function 'main':
112normd.c:65:10: warning: implicit declaration of function 'nprg1' [-Wimplicit-function-declaration]
113   if ((r=nprg1())==-1) exit(1);
114          ^~~~~
115normd.c:67:10: warning: implicit declaration of function 'nprg2' [-Wimplicit-function-declaration]
116   if ((r=nprg2())==-1) exit(1);
117          ^~~~~
118gcc -c -O -fno-builtin normp1.c
119normp1.c: In function 'nprg1':
120normp1.c:43:5: warning: implicit declaration of function 'seeknln' [-Wimplicit-function-declaration]
121     seeknln(); if (k!=0) seeknln(); if (l!=0) seeknln();
122     ^~~~~~~
123normp1.c:186:13: warning: implicit declaration of function 'permnos'; did you mean 'perror'? [-Wimplicit-function-declaration]
124   { *pno=0; permnos(sth,npt,nnth); allorbs(glorb1,gorno1);
125             ^~~~~~~
126             perror
127normp1.c:186:36: warning: implicit declaration of function 'allorbs'; did you mean 'llabs'? [-Wimplicit-function-declaration]
128   { *pno=0; permnos(sth,npt,nnth); allorbs(glorb1,gorno1);
129                                    ^~~~~~~
130                                    llabs
131normp1.c:195:5: warning: implicit declaration of function 'skfaithorb' [-Wimplicit-function-declaration]
132     skfaithorb(); ct=0; inreg=1; regbno=0; goto L3;
133     ^~~~~~~~~~
134normp1.c:227:9: warning: implicit declaration of function 'newbasept'; did you mean 'readbaselo'? [-Wimplicit-function-declaration]
135   { if (newbasept(1)== -1) return(-1);
136         ^~~~~~~~~
137         readbaselo
138normp1.c:425:43: warning: implicit declaration of function 'exprep'; did you mean 'execlp'? [-Wimplicit-function-declaration]
139       { k++; expptr[k]=spptr; spptr+=npt; exprep(j,k,svgptr[i]); }
140                                           ^~~~~~
141                                           execlp
142normp1.c: In function 'newbasept':
143normp1.c:454:10: warning: implicit declaration of function 'intbase'; did you mean 'printbaselo'? [-Wimplicit-function-declaration]
144     if ((intbase(bpt,nnth,&sth,&nbh,hbase,lorbh,svhptr))== -1) return(-1);
145          ^~~~~~~
146          printbaselo
147gcc -c -O -fno-builtin normp2.c
148normp2.c: In function 'setskno':
149normp2.c:80:7: warning: implicit declaration of function 'exprep'; did you mean 'execlp'? [-Wimplicit-function-declaration]
150       exprep(*ap,adno,sva);
151       ^~~~~~
152       execlp
153normp2.c: In function 'nprg2':
154normp2.c:217:53: warning: implicit declaration of function 'expimage'; did you mean 'image'? [-Wimplicit-function-declaration]
155   { bpt=gbase[adno]; imbpt= (sym) ? expcp[*expcp] : expimage(bpt);
156                                                     ^~~~~~~~
157                                                     image
158normp2.c:251:11: warning: implicit declaration of function 'intbase'; did you mean 'printbaselo'? [-Wimplicit-function-declaration]
159     { if (intbase(imbpt,ntct,&sth,&nbh,hbase,lorbh,svhptr)== -1) return(-1);
160           ^~~~~~~
161           printbaselo
162normp2.c:255:9: warning: implicit declaration of function 'allorbs'; did you mean 'llabs'? [-Wimplicit-function-declaration]
163         allorbs(test,imorno[orhct]);   ptr=hlorb[orhct];
164         ^~~~~~~
165         llabs
166normp2.c:309:43: warning: implicit declaration of function 'backimage'; did you mean 'image'? [-Wimplicit-function-declaration]
167           for (j=1;j<=npt;j++) pptr[k][j]=backimage(j);
168                                           ^~~~~~~~~
169                                           image
170gcc -c -O -fno-builtin chb.c
171gcc -O -fno-builtin -o ..//..//bin/x86_64-pc-linux-gnu-default64/normrun normd.o normp1.o normp2.o \
172chb.o permfns.o morepermfns.o
173gcc -c -O -fno-builtin conpdcd.c
174conpdcd.c: In function 'main':
175conpdcd.c:75:7: warning: implicit declaration of function 'cnprg1' [-Wimplicit-function-declaration]
176   if (cnprg1()== -1) exit(1);
177       ^~~~~~
178conpdcd.c:76:24: warning: implicit declaration of function 'cnprg2' [-Wimplicit-function-declaration]
179   if (hg || cong)  if (cnprg2()== -1) exit(1);
180                        ^~~~~~
181gcc -c -O -fno-builtin conpdc1.c
182gcc -c -O -fno-builtin conpdc2.c
183conpdc2.c: In function 'cnprg2':
184conpdc2.c:29:33: warning: implicit declaration of function 'addsvf' [-Wimplicit-function-declaration]
185       { expp[j]=pst; ucp=lcp-1; addsvf(j,p);
186                                 ^~~~~~
187conpdc2.c:30:37: warning: implicit declaration of function 'image' [-Wimplicit-function-declaration]
188         for (k=1;k<=npt;k++) pst[k]=image(k); pst+=npt;
189                                     ^~~~~
190conpdc2.c:50:21: warning: implicit declaration of function 'advance' [-Wimplicit-function-declaration]
191       { if (cind>1) advance(); lcp=conp; trptr=0;
192                     ^~~~~~~
193conpdc2.c:58:18: warning: implicit declaration of function 'addsvb' [-Wimplicit-function-declaration]
194             else addsvb(i,svgptr[bno]);
195                  ^~~~~~
196gcc -O -fno-builtin -o ..//..//bin/x86_64-pc-linux-gnu-default64/conrun conpdcd.o conpdc1.o conpdc2.o
197gcc -c -O -fno-builtin pcd.c
198pcd.c: In function 'main':
199pcd.c:46:7: warning: implicit declaration of function 'pcprog'; did you mean 'perror'? [-Wimplicit-function-declaration]
200   if (pcprog()== -1) exit(1);
201       ^~~~~~
202       perror
203gcc -c -O -fno-builtin pcp.c
204pcp.c: In function 'pcprog':
205pcp.c:98:23: warning: implicit declaration of function 'firstgen'; did you mean 'fwrite'? [-Wimplicit-function-declaration]
206         setfixb(pnf); firstgen(pnf,&hgen,&coeff); k=hgen;
207                       ^~~~~~~~
208                       fwrite
209pcp.c:148:11: warning: implicit declaration of function 'setpinv'; did you mean 'setenv'? [-Wimplicit-function-declaration]
210   exp=np; setpinv();
211           ^~~~~~~
212           setenv
213pcp.c:168:10: warning: implicit declaration of function 'express' [-Wimplicit-function-declaration]
214     hgen=express(pnf,rel,nwt);
215          ^~~~~~~
216gcc -c -O -fno-builtin pcscfns.c
217pcscfns.c: In function 'firstgen':
218pcscfns.c:20:23: warning: implicit declaration of function 'addsv' [-Wimplicit-function-declaration]
219   for (i=1;i<=nb;i++) addsv(image(p[base[i]]),svptr[i]);
220                       ^~~~~
221pcscfns.c:20:29: warning: implicit declaration of function 'image' [-Wimplicit-function-declaration]
222   for (i=1;i<=nb;i++) addsv(image(p[base[i]]),svptr[i]);
223                             ^~~~~
224pcscfns.c: In function 'express':
225pcscfns.c:49:5: warning: implicit declaration of function 'invert'; did you mean 'index'? [-Wimplicit-function-declaration]
226     invert(p,ip); h=hgen-1;
227     ^~~~~~
228     index
229gcc -O -fno-builtin -o ..//..//bin/x86_64-pc-linux-gnu-default64/pcrun pcd.o pcp.o permfns.o pcscfns.o
230gcc -c -O -fno-builtin scd.c
231scd.c: In function 'main':
232scd.c:57:7: warning: implicit declaration of function 'scprog' [-Wimplicit-function-declaration]
233   if (scprog() == -1) exit(1);
234       ^~~~~~
235gcc -c -O -fno-builtin scp.c
236scp.c: In function 'scprog':
237scp.c:63:9: warning: implicit declaration of function 'rsgp' [-Wimplicit-function-declaration]
238     if (rsgp()== -1) return(-1);
239         ^~~~
240scp.c:78:36: warning: implicit declaration of function 'setpinv'; did you mean 'setenv'? [-Wimplicit-function-declaration]
241   op=fopen(outf,"w"); pm1=prime-1; setpinv();
242                                    ^~~~~~~
243                                    setenv
244scp.c:218:16: warning: implicit declaration of function 'expint'; did you mean 'exit'? [-Wimplicit-function-declaration]
245         if ((n=expint(intexp+1-i,intexp+1-j,nwt))>0) goto restart;
246                ^~~~~~
247                exit
248scp.c:236:7: warning: implicit declaration of function 'express' [-Wimplicit-function-declaration]
249       express(tp,rel,0); l= *rel;
250       ^~~~~~~
251scp.c: In function 'rsgp':
252scp.c:284:3: warning: implicit declaration of function 'seeknln' [-Wimplicit-function-declaration]
253   seeknln(); seeknln(); seeknln();
254   ^~~~~~~
255scp.c: In function 'expint':
256scp.c:304:5: warning: implicit declaration of function 'firstgen'; did you mean 'fwrite'? [-Wimplicit-function-declaration]
257   { firstgen(tp,&hgen,&coeff);
258     ^~~~~~~~
259     fwrite
260gcc -O -fno-builtin -o ..//..//bin/x86_64-pc-linux-gnu-default64/scrun scd.o scp.o permfns.o pcscfns.o
261gcc -c -O -fno-builtin slg.c
262gcc -O -fno-builtin -o ..//..//bin/x86_64-pc-linux-gnu-default64/selgen slg.o
263gcc -c -O -fno-builtin mcd.c
264mcd.c: In function 'main':
265mcd.c:49:7: warning: implicit declaration of function 'mcprog' [-Wimplicit-function-declaration]
266   if (mcprog()== -1) exit(1);
267       ^~~~~~
268mcd.c:67:9: warning: implicit declaration of function 'conprog' [-Wimplicit-function-declaration]
269     if (conprog(con)== -1) exit(1);
270         ^~~~~~~
271gcc -c -O -fno-builtin mcp.c
272mcp.c: In function 'mcprog':
273mcp.c:23:3: warning: implicit declaration of function 'setpinv'; did you mean 'setenv'? [-Wimplicit-function-declaration]
274   setpinv();
275   ^~~~~~~
276   setenv
277mcp.c:36:5: warning: implicit declaration of function 'readmat'; did you mean 'read'? [-Wimplicit-function-declaration]
278   { readmat(mat[i]);
279     ^~~~~~~
280     read
281mcp.c:37:9: warning: implicit declaration of function 'inv'; did you mean 'link'? [-Wimplicit-function-declaration]
282     if (inv(mat[i],mat[i+1]) == -1) return(-1);
283         ^~~
284         link
285mcp.c:54:5: warning: implicit declaration of function 'prod'; did you mean 'pread'? [-Wimplicit-function-declaration]
286     prod(cp,mat[nm2-1]); inv(mat[nm2-1],mat[nm2]);
287     ^~~~
288     pread
289mcp.c:76:3: warning: implicit declaration of function 'readbaselo' [-Wimplicit-function-declaration]
290   readbaselo(nb,base,lorb); readpsv(0,nb,nperms,svptr);
291   ^~~~~~~~~~
292mcp.c:76:29: warning: implicit declaration of function 'readpsv'; did you mean 'read'? [-Wimplicit-function-declaration]
293   readbaselo(nb,base,lorb); readpsv(0,nb,nperms,svptr);
294                             ^~~~~~~
295                             read
296mcp.c: In function 'conprog':
297mcp.c:117:27: warning: implicit declaration of function 'trans'; did you mean 'srand'? [-Wimplicit-function-declaration]
298   { for (i=0;i<nm2;i+=2) {trans(mat[i],mat[i+1]); inv(mat[i+1],mat[i]);}}
299                           ^~~~~
300                           srand
301mcp.c:141:30: warning: implicit declaration of function 'readvec'; did you mean 'read'? [-Wimplicit-function-declaration]
302   { for (i=nperms;i>=1;i--) {readvec(pptr[nm2+i],0); seeknln(); }
303                              ^~~~~~~
304                              read
305mcp.c:149:27: warning: implicit declaration of function 'addsv' [-Wimplicit-function-declaration]
306       for (j=1;j<=nb;j++) addsv(image(p[base[j]]),svptr[j]);
307                           ^~~~~
308mcp.c:149:33: warning: implicit declaration of function 'image' [-Wimplicit-function-declaration]
309       for (j=1;j<=nb;j++) addsv(image(p[base[j]]),svptr[j]);
310                                 ^~~~~
311mcp.c:175:15: warning: implicit declaration of function 'comm' [-Wimplicit-function-declaration]
312             { comm(cv,cc,mat[nm2+j]);
313               ^~~~
314mcp.c:193:5: warning: implicit declaration of function 'printmat'; did you mean 'printf'? [-Wimplicit-function-declaration]
315     printmat(cbm);
316     ^~~~~~~~
317     printf
318mcp.c:210:10: warning: implicit declaration of function 'cbdef' [-Wimplicit-function-declaration]
319       id=cbdef(nm2+1,nm2+nperms,lmat+1,d1,d2,wt,&class);
320          ^~~~~
321gcc -c -O -fno-builtin matfns.c
322gcc -O -fno-builtin -o ..//..//bin/x86_64-pc-linux-gnu-default64/matcalc mcd.o mcp.o matfns.o
323gcc -c -O -fno-builtin nqmd.c
324nqmd.c: In function 'main':
325nqmd.c:52:7: warning: implicit declaration of function 'nqmprog' [-Wimplicit-function-declaration]
326   if (nqmprog()== -1) exit(1);
327       ^~~~~~~
328gcc -c -O -fno-builtin nqmp.c
329nqmp.c: In function 'nqmprog':
330nqmp.c:38:7: warning: implicit declaration of function 'ingp' [-Wimplicit-function-declaration]
331   if (ingp() == -1) {fprintf(stderr,"Input error.\n"); return(-1); }
332       ^~~~
333nqmp.c:59:11: warning: implicit declaration of function 'intgen'; did you mean 'index'? [-Wimplicit-function-declaration]
334       if (intgen(j,i)== -1) return(-1);
335           ^~~~~~
336           index
337nqmp.c:64:13: warning: implicit declaration of function 'assoc' [-Wimplicit-function-declaration]
338         if (assoc(j,k,l)) if (subrel(j,i)== -1) return(-1);
339             ^~~~~
340nqmp.c:64:31: warning: implicit declaration of function 'subrel'; did you mean 'sbrk'? [-Wimplicit-function-declaration]
341         if (assoc(j,k,l)) if (subrel(j,i)== -1) return(-1);
342                               ^~~~~~
343                               sbrk
344nqmp.c:67:34: warning: implicit declaration of function 'prnrel'; did you mean 'profil'? [-Wimplicit-function-declaration]
345       { if (assoc(j,i,i)) if ((l=prnrel(0))== -1) goto nextcl;
346                                  ^~~~~~
347                                  profil
348nqmp.c:122:11: warning: implicit declaration of function 'zero'; did you mean 'bzero'? [-Wimplicit-function-declaration]
349           zero(nexpnt,enexpnt); p=pf-2; wc=wf-2;
350           ^~~~
351           bzero
352nqmp.c:123:27: warning: implicit declaration of function 'enter'; did you mean 'ecvt_r'? [-Wimplicit-function-declaration]
353           while (p>=ps) { enter(imintg[*p],-*(p+1),tlintg[*p]); p-=2; }
354                           ^~~~~
355                           ecvt_r
356nqmp.c:126:31: warning: implicit declaration of function 'collect'; did you mean 'calloc'? [-Wimplicit-function-declaration]
357           zero(expnt,eexpnt); collect(wc,wf,1);
358                               ^~~~~~~
359                               calloc
360nqmp.c:213:3: warning: implicit declaration of function 'outgp' [-Wimplicit-function-declaration]
361   outgp();
362   ^~~~~
363gcc -c -O -fno-builtin nqmfns.c
364gcc -O -fno-builtin -o ..//..//bin/x86_64-pc-linux-gnu-default64/nqmrun nqmd.o nqmp.o nqmfns.o
365gcc -c -O -fno-builtin nqd.c
366nqd.c: In function 'main':
367nqd.c:88:5: warning: implicit declaration of function 'nqprog' [-Wimplicit-function-declaration]
368   n=nqprog();
369     ^~~~~~
370gcc -c -O -fno-builtin nqp1.c
371nqp1.c: In function 'nqprog':
372nqp1.c:52:5: warning: implicit declaration of function 'setpinv'; did you mean 'setenv'? [-Wimplicit-function-declaration]
373     setpinv(); calcfm(0); return(0);
374     ^~~~~~~
375     setenv
376nqp1.c:52:16: warning: implicit declaration of function 'calcfm'; did you mean 'ualarm'? [-Wimplicit-function-declaration]
377     setpinv(); calcfm(0); return(0);
378                ^~~~~~
379                ualarm
380nqp1.c:54:7: warning: implicit declaration of function 'rdmats'; did you mean 'rpmatch'? [-Wimplicit-function-declaration]
381   if (rdmats()== -1) return(-1);
382       ^~~~~~
383       rpmatch
384nqp1.c:79:35: warning: implicit declaration of function 'intmats' [-Wimplicit-function-declaration]
385       if (ip==0) i=1; else if ((i=intmats())== -1) return(-1);
386                                   ^~~~~~~
387nqp1.c:85:42: warning: implicit declaration of function 'ingp' [-Wimplicit-function-declaration]
388         {strcpy(inf1,inf0); stage=2; if (ingp(1)== -1) return(-1); onng=nng;}
389                                          ^~~~
390nqp1.c:126:11: warning: implicit declaration of function 'spact' [-Wimplicit-function-declaration]
391       if (spact()== -1) return(-1);
392           ^~~~~
393nqp1.c:135:7: warning: implicit declaration of function 'intact'; did you mean 'linkat'? [-Wimplicit-function-declaration]
394     i=intact();
395       ^~~~~~
396       linkat
397nqp1.c:145:28: warning: implicit declaration of function 'readmat'; did you mean 'read'? [-Wimplicit-function-declaration]
398     for (i=1;i<=ngens;i++) readmat(mat[i]);
399                            ^~~~~~~
400                            read
401nqp1.c:163:17: warning: implicit declaration of function 'comprels' [-Wimplicit-function-declaration]
402   if (crel) if (comprels()== -1) return(-1);
403                 ^~~~~~~~
404nqp1.c: In function 'intmats':
405nqp1.c:237:19: warning: implicit declaration of function 'prod'; did you mean 'pread'? [-Wimplicit-function-declaration]
406       rpb-=(l+1); prod(cp,mat[ct+ngens]);
407                   ^~~~
408                   pread
409nqp1.c:257:7: warning: implicit declaration of function 'cbdef' [-Wimplicit-function-declaration]
410   if (cbdef(1,ct,cbno,sd1,sd2,swt,&matcl))
411       ^~~~~
412nqp1.c:262:19: warning: implicit declaration of function 'inv'; did you mean 'link'? [-Wimplicit-function-declaration]
413     cbno2=cbno+2; inv(cbm,mat[cbno+1]); newmat=mat[cbno2];
414                   ^~~
415                   link
416nqp1.c: In function 'calcfm':
417nqp1.c:297:46: warning: implicit declaration of function 'intgen'; did you mean 'index'? [-Wimplicit-function-declaration]
418           if (wt[i]==1 && wt[j]==(cl-1)) if (intgen(j,i)== -1) return(-1);
419                                              ^~~~~~
420                                              index
421nqp1.c:305:17: warning: implicit declaration of function 'assoc' [-Wimplicit-function-declaration]
422             if (assoc(j,k,l)) if (subrel(j,i)== -1) return(-1);
423                 ^~~~~
424nqp1.c:305:35: warning: implicit declaration of function 'subrel'; did you mean 'sbrk'? [-Wimplicit-function-declaration]
425             if (assoc(j,k,l)) if (subrel(j,i)== -1) return(-1);
426                                   ^~~~~~
427                                   sbrk
428nqp1.c:311:20: warning: implicit declaration of function 'prnrel'; did you mean 'profil'? [-Wimplicit-function-declaration]
429           { if ((l=prnrel())== 0) goto nextcl; if (l== -1) return(-1);}
430                    ^~~~~~
431                    profil
432nqp1.c:332:5: warning: implicit declaration of function 'outgp' [-Wimplicit-function-declaration]
433     outgp();
434     ^~~~~
435gcc -c -O -fno-builtin nqp2.c
436nqp2.c: In function 'spact':
437nqp2.c:25:7: warning: implicit declaration of function 'ingp' [-Wimplicit-function-declaration]
438   if (ingp(inp) == -1) return(-1);
439       ^~~~
440nqp2.c:41:9: warning: implicit declaration of function 'inv'; did you mean 'link'? [-Wimplicit-function-declaration]
441     if (inv(mat[i],mat[facexp+i]) == -1) return(-1);
442         ^~~
443         link
444nqp2.c:55:5: warning: implicit declaration of function 'prod'; did you mean 'pread'? [-Wimplicit-function-declaration]
445     prod(cp,mat[i]);
446     ^~~~
447     pread
448nqp2.c:61:29: warning: implicit declaration of function 'printmat'; did you mean 'printf'? [-Wimplicit-function-declaration]
449     for (i=1;i<=facexp;i++) printmat(mat[i]);
450                             ^~~~~~~~
451                             printf
452nqp2.c:72:33: warning: implicit declaration of function 'comm' [-Wimplicit-function-declaration]
453     for (j=1;j<=facexp;j++) if (comm(v1,v2,mat[j]))
454                                 ^~~~
455nqp2.c:89:13: warning: implicit declaration of function 'intgen'; did you mean 'index'? [-Wimplicit-function-declaration]
456       { if (intgen(i,fg)== -1) return(-1);
457             ^~~~~~
458             index
459nqp2.c:99:17: warning: implicit declaration of function 'assoc' [-Wimplicit-function-declaration]
460           { if (assoc(i,d1[fg],d2[fg]))
461                 ^~~~~
462nqp2.c:100:17: warning: implicit declaration of function 'subrel'; did you mean 'sbrk'? [-Wimplicit-function-declaration]
463             if (subrel(i,fg)== -1) return(-1);
464                 ^~~~~~
465                 sbrk
466nqp2.c:116:20: warning: implicit declaration of function 'prnrel'; did you mean 'profil'? [-Wimplicit-function-declaration]
467           { if ((l=prnrel())==0) goto nextcl; if (l== -1) return(-1); }
468                    ^~~~~~
469                    profil
470nqp2.c:121:5: warning: implicit declaration of function 'bgc' [-Wimplicit-function-declaration]
471     bgc(); rsp=rpb-rel+1;
472     ^~~
473nqp2.c:151:52: warning: implicit declaration of function 'nchg' [-Wimplicit-function-declaration]
474     { l=prnrel(); if (l== -1) return(-1); if (l>1) nchg(); }
475                                                    ^~~~
476nqp2.c:160:5: warning: implicit declaration of function 'outgp' [-Wimplicit-function-declaration]
477     outgp();
478     ^~~~~
479nqp2.c: In function 'nchg':
480nqp2.c:179:7: warning: implicit declaration of function 'expand'; did you mean 'srand'? [-Wimplicit-function-declaration]
481     { expand(p,rpf,onng); p=rpf; n=prime-n; q=p+onng; v1=nexpnt+1;
482       ^~~~~~
483       srand
484nqp2.c:195:17: warning: implicit declaration of function 'compress' [-Wimplicit-function-declaration]
485         *p=len; compress(p,r,onng);
486                 ^~~~~~~~
487nqp2.c: In function 'intact':
488nqp2.c:276:3: warning: implicit declaration of function 'readmat'; did you mean 'read'? [-Wimplicit-function-declaration]
489   readmat(mat[cbno+2]);
490   ^~~~~~~
491   read
492nqp2.c:286:17: warning: implicit declaration of function 'zero'; did you mean 'bzero'? [-Wimplicit-function-declaration]
493       b=sd2[i]; zero(nexpnt,enexpnt);
494                 ^~~~
495                 bzero
496nqp2.c:289:23: warning: implicit declaration of function 'entvec' [-Wimplicit-function-declaration]
497         while (q>p) { entvec(npcb[*q-intexp],bim[*q-intexp],-*(q+1)); q-=2;}
498                       ^~~~~~
499nqp2.c:292:27: warning: implicit declaration of function 'enter'; did you mean 'ecvt_r'? [-Wimplicit-function-declaration]
500       entvec(null,ia,-1); enter(ib,-1); entvec(null,ia,1); enter(ib,1);
501                           ^~~~~
502                           ecvt_r
503nqp2.c:293:27: warning: implicit declaration of function 'collect'; did you mean 'calloc'? [-Wimplicit-function-declaration]
504       zero(expnt,eexpnt); collect(wc,wf,1);
505                           ^~~~~~~
506                           calloc
507gcc -c -O -fno-builtin nqp3.c
508nqp3.c: In function 'comprels':
509nqp3.c:25:7: warning: implicit declaration of function 'expand'; did you mean 'srand'? [-Wimplicit-function-declaration]
510     { expand(q,rpf,onng); if ((l=rpf[i])!=0) p[j]=prime-l; }
511       ^~~~~~
512       srand
513nqp3.c:70:3: warning: implicit declaration of function 'readmat'; did you mean 'read'? [-Wimplicit-function-declaration]
514   readmat(mat[1]); readmat(mat[2]);
515   ^~~~~~~
516   read
517nqp3.c:71:28: warning: implicit declaration of function 'prod'; did you mean 'pread'? [-Wimplicit-function-declaration]
518   *cp=2; cp[1]=2; cp[2]=1; prod(cp,mat[3]);
519                            ^~~~
520                            pread
521nqp3.c:72:3: warning: implicit declaration of function 'inv'; did you mean 'link'? [-Wimplicit-function-declaration]
522   inv(mat[3],mat[2]); trans(mat[2],mat[1]);
523   ^~~
524   link
525nqp3.c:72:23: warning: implicit declaration of function 'trans'; did you mean 'srand'? [-Wimplicit-function-declaration]
526   inv(mat[3],mat[2]); trans(mat[2],mat[1]);
527                       ^~~~~
528                       srand
529nqp3.c:87:5: warning: implicit declaration of function 'zero'; did you mean 'bzero'? [-Wimplicit-function-declaration]
530     zero(expnt,eexpnt);
531     ^~~~
532     bzero
533nqp3.c:96:7: warning: implicit declaration of function 'collect'; did you mean 'calloc'? [-Wimplicit-function-declaration]
534       collect(wc,wf,1);
535       ^~~~~~~
536       calloc
537nqp3.c:115:5: warning: implicit declaration of function 'im' [-Wimplicit-function-declaration]
538     im(v1,v2,cbmat);
539     ^~
540gcc -c -O -fno-builtin nqfns.c
541nqfns.c: In function 'intgen':
542nqfns.c:476:19: warning: implicit declaration of function 'bgc' [-Wimplicit-function-declaration]
543     if (wsp>marg) bgc(); else return(-1);
544                   ^~~
545gcc -O -fno-builtin -o ..//..//bin/x86_64-pc-linux-gnu-default64/nqrun nqd.o nqp1.o nqp2.o nqp3.o nqfns.o \
546matfns.o
547gcc -c -O -fno-builtin grd.c
548grd.c: In function 'main':
549grd.c:44:7: warning: implicit declaration of function 'grprog' [-Wimplicit-function-declaration]
550   if (grprog()== -1) exit(1);
551       ^~~~~~
552gcc -c -O -fno-builtin grp.c
553grp.c: In function 'grprog':
554grp.c:89:11: warning: implicit declaration of function 'addrel'; did you mean 'addsv'? [-Wimplicit-function-declaration]
555       if (addrel()== -1) return(-1);
556           ^~~~~~
557           addsv
558grp.c:113:28: warning: implicit declaration of function 'scanrel'; did you mean 'scanf'? [-Wimplicit-function-declaration]
559    if (RD(ccos,scanno)==0) scanrel();
560                            ^~~~~~~
561                            scanf
562grp.c: In function 'scanrel':
563grp.c:212:31: warning: implicit declaration of function 'coinc' [-Wimplicit-function-declaration]
564   if (comp) { if (fcos!=bcos) coinc(fcos,bcos); WD(ccos,scanno); return(0); }
565                               ^~~~~
566gcc -O -fno-builtin -o ..//..//bin/x86_64-pc-linux-gnu-default64/grrun grd.o grp.o permfns.o
567gcc -c -O -fno-builtin extpd.c
568extpd.c: In function 'main':
569extpd.c:45:7: warning: implicit declaration of function 'extpprog' [-Wimplicit-function-declaration]
570   if (extpprog()==-1) exit(1);
571       ^~~~~~~~
572gcc -c -O -fno-builtin exa.c
573exa.c: In function 'extpprog':
574exa.c:59:5: warning: implicit declaration of function 'setpinv'; did you mean 'setenv'? [-Wimplicit-function-declaration]
575     setpinv();
576     ^~~~~~~
577     setenv
578exa.c:69:28: warning: implicit declaration of function 'readmat'; did you mean 'readpsv'? [-Wimplicit-function-declaration]
579     for (i=0;i<np2;i+=2) { readmat(mat[i]); inv(mat[i],mat[i+1]);}
580                            ^~~~~~~
581                            readpsv
582exa.c:69:45: warning: implicit declaration of function 'inv'; did you mean 'link'? [-Wimplicit-function-declaration]
583     for (i=0;i<np2;i+=2) { readmat(mat[i]); inv(mat[i],mat[i+1]);}
584                                             ^~~
585                                             link
586exa.c:164:13: warning: implicit declaration of function 'scanrel'; did you mean 'scanf'? [-Wimplicit-function-declaration]
587       { if (scanrel()== -1)  return(-1);
588             ^~~~~~~
589             scanf
590exa.c:195:29: warning: implicit declaration of function 'gc'; did you mean 'gcvt'? [-Wimplicit-function-declaration]
591     if (bno>1) { maxcos=lo; gc(); ocst=cst; }
592                             ^~
593                             gcvt
594gcc -c -O -fno-builtin exb.c
595exb.c: In function 'scanrel':
596exb.c:24:26: warning: implicit declaration of function 'action'; did you mean 'atol'? [-Wimplicit-function-declaration]
597   if (mult==0 && ccos>1) action(p,def[ccos]);
598                          ^~~~~~
599                          atol
600exb.c:29:9: warning: implicit declaration of function 'concat'; did you mean 'linkat'? [-Wimplicit-function-declaration]
601     if (concat(wd1,coeff[rel[i]][fcos])== -1) return(-1);
602         ^~~~~~
603         linkat
604exb.c:33:25: warning: implicit declaration of function 'coinc' [-Wimplicit-function-declaration]
605   { if (fcos!=bcos) esc=coinc(fcos,bcos);
606                         ^~~~~
607exb.c:34:25: warning: implicit declaration of function 'concheck' [-Wimplicit-function-declaration]
608     else if (conch) if (concheck()== -1) return(-1);
609                         ^~~~~~~~
610exb.c:47:15: warning: implicit declaration of function 'ainvb' [-Wimplicit-function-declaration]
611           if (ainvb(wd1,wd2,wd3)== -1) return(-1);
612               ^~~~~
613exb.c:48:23: warning: implicit declaration of function 'reduce'; did you mean 'revoke'? [-Wimplicit-function-declaration]
614           if (*wd3>2) reduce(wd3);
615                       ^~~~~~
616                       revoke
617exb.c:49:15: warning: implicit declaration of function 'comp'; did you mean 'bcmp'? [-Wimplicit-function-declaration]
618           if (comp(wd3,coeff[l]+fcos)== -1) return(-1);
619               ^~~~
620               bcmp
621exb.c:50:11: warning: implicit declaration of function 'invwd' [-Wimplicit-function-declaration]
622           invwd(wd3,wd2);
623           ^~~~~
624exb.c: In function 'coinc':
625exb.c:94:7: warning: implicit declaration of function 'compb' [-Wimplicit-function-declaration]
626   if (compb(wd3,cco+hc)== -1) return(-1);
627       ^~~~~
628exb.c:105:9: warning: implicit declaration of function 'expand'; did you mean 'srand'? [-Wimplicit-function-declaration]
629       { expand(wd1,coeff[i][hc]);
630         ^~~~~~
631         srand
632gcc -c -O -fno-builtin exc.c
633exc.c: In function 'concat':
634exc.c:134:20: warning: implicit declaration of function 'reduce'; did you mean 'revoke'? [-Wimplicit-function-declaration]
635   if (*a>mwl2) if (reduce(a)== -1) return(-1);
636                    ^~~~~~
637                    revoke
638exc.c: In function 'reduce':
639exc.c:216:27: warning: implicit declaration of function 'addsv' [-Wimplicit-function-declaration]
640   for (i=bno+1;i<=nb;i++) addsv(image(base[i]),svptr[i]);
641                           ^~~~~
642exc.c:216:33: warning: implicit declaration of function 'image' [-Wimplicit-function-declaration]
643   for (i=bno+1;i<=nb;i++) addsv(image(base[i]),svptr[i]);
644                                 ^~~~~
645gcc -O -fno-builtin -o ..//..//bin/x86_64-pc-linux-gnu-default64/extprun extpd.o exa.o exb.o exc.o \
646permfns.o matfns.o
647gcc -c -O -fno-builtin crd.c
648crd.c: In function 'main':
649crd.c:45:7: warning: implicit declaration of function 'crprog1' [-Wimplicit-function-declaration]
650   if (crprog1()== -1) exit(1);
651       ^~~~~~~
652crd.c:46:7: warning: implicit declaration of function 'crprog2' [-Wimplicit-function-declaration]
653   if (crprog2()== -1) exit(1);;
654       ^~~~~~~
655gcc -c -O -fno-builtin crp1.c
656gcc -c -O -fno-builtin crp2.c
657crp2.c: In function 'crprog2':
658crp2.c:31:5: warning: implicit declaration of function 'setpinv'; did you mean 'setenv'? [-Wimplicit-function-declaration]
659     setpinv();
660     ^~~~~~~
661     setenv
662crp2.c:40:28: warning: implicit declaration of function 'readmat'; did you mean 'read'? [-Wimplicit-function-declaration]
663     for (i=0;i<nph2;i+=2) {readmat(mat[i]); inv(mat[i],mat[i+1]); }
664                            ^~~~~~~
665                            read
666crp2.c:40:45: warning: implicit declaration of function 'inv'; did you mean 'link'? [-Wimplicit-function-declaration]
667     for (i=0;i<nph2;i+=2) {readmat(mat[i]); inv(mat[i],mat[i+1]); }
668                                             ^~~
669                                             link
670crp2.c:130:13: warning: implicit declaration of function 'scan'; did you mean 'scanf'? [-Wimplicit-function-declaration]
671       { if (scan(k,&l2)== -1) return(-1);
672             ^~~~
673             scanf
674crp2.c: In function 'scan':
675crp2.c:173:9: warning: implicit declaration of function 'action'; did you mean 'atol'? [-Wimplicit-function-declaration]
676       { action(v1,conco);
677         ^~~~~~
678         atol
679gcc -O -fno-builtin -o ..//..//bin/x86_64-pc-linux-gnu-default64/crrun crd.o crp1.o crp2.o matfns.o
680gcc -c -O -fno-builtin readrels.c
681gcc -O -fno-builtin -o ..//..//bin/x86_64-pc-linux-gnu-default64/readrels readrels.o
682cp cohomology.gap ..//..//bin/x86_64-pc-linux-gnu-default64/cohomology.gap
683chmod +x ..//..//bin/x86_64-pc-linux-gnu-default64/cohomology.gap
684cp execcmd.gap ..//..//bin/x86_64-pc-linux-gnu-default64/execcmd.gap
685chmod +x ..//..//bin/x86_64-pc-linux-gnu-default64/execcmd.gap
686cp calcpres.gap ..//..//bin/x86_64-pc-linux-gnu-default64/calcpres.gap
687chmod +x ..//..//bin/x86_64-pc-linux-gnu-default64/calcpres.gap
688make[5]: Leaving directory '/home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/src/pkg/cohomolo-1.6.7/standalone/progs.d'
689make[4]: Leaving directory '/home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/src/pkg/cohomolo-1.6.7'
690bin/ -> /home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/inst/home/martin/sage-develop/local/lib/gap/pkg/cohomolo-1.6.7
691make[4]: Entering directory '/home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/src/pkg/cohomolo-1.6.7'
692make[4]: warning: -jN forced in submake: disabling jobserver mode.
693cd standalone/progs.d; make clean
694make[5]: Entering directory '/home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/src/pkg/cohomolo-1.6.7/standalone/progs.d'
695/bin/rm -f *.o
696make[5]: Leaving directory '/home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/src/pkg/cohomolo-1.6.7/standalone/progs.d'
697make[4]: Leaving directory '/home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/src/pkg/cohomolo-1.6.7'
698********************************************************************************
699Error: source file/directory bin does not exist
700********************************************************************************
701
702real    0m41.647s
703user    0m13.288s
704sys     0m3.272s
705************************************************************************
706Error installing package gap_packages-4.10.0
707************************************************************************
708Please email sage-devel (http://groups.google.com/group/sage-devel)
709explaining the problem and including the log file
710  /home/martin/sage-develop/logs/pkgs/gap_packages-4.10.0.log
711Describe your computer, operating system, etc.
712If you want to try to fix the problem yourself, *don't* just cd to
713/home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0 and type 'make' or whatever is appropriate.
714Instead, the following commands setup all environment variables
715correctly and load a subshell for you to debug the error:
716  (cd '/home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0' && '/home/martin/sage-develop/sage' --sh)
717When you are done debugging, you can type "exit" to leave the subshell.
718************************************************************************
719Found local metadata for gap_packages-4.10.0
720Using cached file /home/martin/sage-develop/upstream/gap-4.10.0.tar.gz
721gap_packages-4.10.0
722====================================================
723Setting up build directory for gap_packages-4.10.0
724Finished extraction
725Applying patches from ../patches...
726Applying ../patches/cohomolo.patch
727patching file pkg/cohomolo-1.6.7/Makefile.in
728patching file pkg/cohomolo-1.6.7/standalone/progs.d/findpres/makefile
729patching file pkg/cohomolo-1.6.7/standalone/progs.d/makefile
730patching file pkg/cohomolo-1.6.7/standalone/progs.d/makefile.gap
731Applying ../patches/guava.patch
732patching file pkg/guava-3.14/Makefile.in
733patching file pkg/guava-3.14/src/leon/Makefile
734patching file pkg/guava-3.14/src/leon/Makefile.in
735****************************************************
736Host system:
737Linux Martin-Laptop 4.13.0-46-generic #51-Ubuntu SMP Tue Jun 12 12:36:29 UTC 2018 x86_64 x86_64 x86_64 GNU/Linux
738****************************************************
739C compiler: gcc
740C compiler version:
741Using built-in specs.
742COLLECT_GCC=gcc
743COLLECT_LTO_WRAPPER=/home/martin/sage-develop/local/libexec/gcc/x86_64-pc-linux-gnu/7.2.0/lto-wrapper
744Target: x86_64-pc-linux-gnu
745Configured with: ../src/configure --prefix=/home/martin/sage-develop/local --with-local-prefix=/home/martin/sage-develop/local --with-gmp=/home/martin/sage-develop/local --with-mpfr=/home/martin/sage-develop/local --with-mpc=/home/martin/sage-develop/local --with-system-zlib --disable-multilib --disable-nls --enable-languages=c,c++,fortran --disable-libitm 
746Thread model: posix
747gcc version 7.2.0 (GCC)
748****************************************************
749No record that 'gap_packages' was ever installed; skipping uninstall
750aclib-1.3.1 -> /home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/inst/home/martin/sage-develop/local/share/gap/pkg
751AutoDoc-2018.09.20 -> /home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/inst/home/martin/sage-develop/local/share/gap/pkg
752corelg -> /home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/inst/home/martin/sage-develop/local/share/gap/pkg
753crime-1.5 -> /home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/inst/home/martin/sage-develop/local/share/gap/pkg
754cryst -> /home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/inst/home/martin/sage-develop/local/share/gap/pkg
755crystcat -> /home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/inst/home/martin/sage-develop/local/share/gap/pkg
756design -> /home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/inst/home/martin/sage-develop/local/share/gap/pkg
757gbnp -> /home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/inst/home/martin/sage-develop/local/share/gap/pkg
758Hap1.15 -> /home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/inst/home/martin/sage-develop/local/share/gap/pkg
759HAPcryst -> /home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/inst/home/martin/sage-develop/local/share/gap/pkg
760hecke-1.5 -> /home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/inst/home/martin/sage-develop/local/share/gap/pkg
761liealgdb-2.2 -> /home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/inst/home/martin/sage-develop/local/share/gap/pkg
762liepring-1.9.2 -> /home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/inst/home/martin/sage-develop/local/share/gap/pkg
763liering -> /home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/inst/home/martin/sage-develop/local/share/gap/pkg
764loops -> /home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/inst/home/martin/sage-develop/local/share/gap/pkg
765MapClass-1.4.3 -> /home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/inst/home/martin/sage-develop/local/share/gap/pkg
766polymaking -> /home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/inst/home/martin/sage-develop/local/share/gap/pkg
767qpa-version-1.29 -> /home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/inst/home/martin/sage-develop/local/share/gap/pkg
768quagroup -> /home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/inst/home/martin/sage-develop/local/share/gap/pkg
769radiroot-2.8 -> /home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/inst/home/martin/sage-develop/local/share/gap/pkg
770repsn -> /home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/inst/home/martin/sage-develop/local/share/gap/pkg
771sla -> /home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/inst/home/martin/sage-develop/local/share/gap/pkg
772sonata-2.9.1 -> /home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/inst/home/martin/sage-develop/local/share/gap/pkg
773Toric-1.9.4 -> /home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/inst/home/martin/sage-develop/local/share/gap/pkg
774utils-0.59 -> /home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/inst/home/martin/sage-develop/local/share/gap/pkg
775Building GAP package cohomolo-1.6.7
776Building gap_packages-4.10.0
777make[4]: Entering directory '/home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/src/pkg/cohomolo-1.6.7'
778make[4]: warning: -jN forced in submake: disabling jobserver mode.
779mkdir -p bin/x86_64-pc-linux-gnu-default64;
780cd standalone/progs.d;\
781make CC="gcc" BIN="..//..//bin/x86_64-pc-linux-gnu-default64" COPTS=""
782make[5]: Entering directory '/home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/src/pkg/cohomolo-1.6.7/standalone/progs.d'
783gcc -c -O -fno-builtin gpd.c
784gpd.c: In function 'main':
785gpd.c:37:7: warning: implicit declaration of function 'gpprog' [-Wimplicit-function-declaration]
786   if (gpprog()== -1) exit(1);
787       ^~~~~~
788gcc -c -O -fno-builtin gpp.c
789gcc -c -O -fno-builtin permfns.c
790gcc -O -fno-builtin -o ..//..//bin/x86_64-pc-linux-gnu-default64/gprun gpd.o gpp.o permfns.o
791gcc -c -O -fno-builtin egd.c
792egd.c: In function 'main':
793egd.c:31:7: warning: implicit declaration of function 'egprog' [-Wimplicit-function-declaration]
794   if (egprog()== -1) exit(1);
795       ^~~~~~
796gcc -c -O -fno-builtin egp.c
797gcc -O -fno-builtin -o ..//..//bin/x86_64-pc-linux-gnu-default64/egrun egd.o egp.o permfns.o
798gcc -c -O -fno-builtin syld.c
799syld.c: In function 'main':
800syld.c:31:7: warning: implicit declaration of function 'sylprog' [-Wimplicit-function-declaration]
801   if (sylprog()== -1) exit(1);
802       ^~~~~~~
803gcc -c -O -fno-builtin sylp.c
804sylp.c: In function 'sylprog':
805sylp.c:90:33: warning: implicit declaration of function 'exprep'; did you mean 'execlp'? [-Wimplicit-function-declaration]
806     { k++; expptr[k]=z; z+=npt; exprep(j,k,svgptr[i]); }
807                                 ^~~~~~
808                                 execlp
809sylp.c:117:9: warning: implicit declaration of function 'allorbs'; did you mean 'llabs'? [-Wimplicit-function-declaration]
810       { allorbs(lporb,orno); bt=0;
811         ^~~~~~~
812         llabs
813sylp.c:149:18: warning: implicit declaration of function 'expimage'; did you mean 'image'? [-Wimplicit-function-declaration]
814             { im=expimage(base[adno]); l=orno[im];
815                  ^~~~~~~~
816                  image
817sylp.c:166:28: warning: implicit declaration of function 'ppower'; did you mean 'popen'? [-Wimplicit-function-declaration]
818             if (k==adno && ppower(ct)==0) {ok=0;break;}
819                            ^~~~~~
820                            popen
821sylp.c:172:19: warning: implicit declaration of function 'deforbperm'; did you mean 'readperm'? [-Wimplicit-function-declaration]
822             bt=0; deforbperm();
823                   ^~~~~~~~~~
824                   readperm
825gcc -c -O -fno-builtin morepermfns.c
826gcc -O -fno-builtin -o ..//..//bin/x86_64-pc-linux-gnu-default64/sylrun syld.o sylp.o morepermfns.o permfns.o
827gcc -c -O -fno-builtin normd.c
828normd.c: In function 'main':
829normd.c:65:10: warning: implicit declaration of function 'nprg1' [-Wimplicit-function-declaration]
830   if ((r=nprg1())==-1) exit(1);
831          ^~~~~
832normd.c:67:10: warning: implicit declaration of function 'nprg2' [-Wimplicit-function-declaration]
833   if ((r=nprg2())==-1) exit(1);
834          ^~~~~
835gcc -c -O -fno-builtin normp1.c
836normp1.c: In function 'nprg1':
837normp1.c:43:5: warning: implicit declaration of function 'seeknln' [-Wimplicit-function-declaration]
838     seeknln(); if (k!=0) seeknln(); if (l!=0) seeknln();
839     ^~~~~~~
840normp1.c:186:13: warning: implicit declaration of function 'permnos'; did you mean 'perror'? [-Wimplicit-function-declaration]
841   { *pno=0; permnos(sth,npt,nnth); allorbs(glorb1,gorno1);
842             ^~~~~~~
843             perror
844normp1.c:186:36: warning: implicit declaration of function 'allorbs'; did you mean 'llabs'? [-Wimplicit-function-declaration]
845   { *pno=0; permnos(sth,npt,nnth); allorbs(glorb1,gorno1);
846                                    ^~~~~~~
847                                    llabs
848normp1.c:195:5: warning: implicit declaration of function 'skfaithorb' [-Wimplicit-function-declaration]
849     skfaithorb(); ct=0; inreg=1; regbno=0; goto L3;
850     ^~~~~~~~~~
851normp1.c:227:9: warning: implicit declaration of function 'newbasept'; did you mean 'readbaselo'? [-Wimplicit-function-declaration]
852   { if (newbasept(1)== -1) return(-1);
853         ^~~~~~~~~
854         readbaselo
855normp1.c:425:43: warning: implicit declaration of function 'exprep'; did you mean 'execlp'? [-Wimplicit-function-declaration]
856       { k++; expptr[k]=spptr; spptr+=npt; exprep(j,k,svgptr[i]); }
857                                           ^~~~~~
858                                           execlp
859normp1.c: In function 'newbasept':
860normp1.c:454:10: warning: implicit declaration of function 'intbase'; did you mean 'printbaselo'? [-Wimplicit-function-declaration]
861     if ((intbase(bpt,nnth,&sth,&nbh,hbase,lorbh,svhptr))== -1) return(-1);
862          ^~~~~~~
863          printbaselo
864gcc -c -O -fno-builtin normp2.c
865normp2.c: In function 'setskno':
866normp2.c:80:7: warning: implicit declaration of function 'exprep'; did you mean 'execlp'? [-Wimplicit-function-declaration]
867       exprep(*ap,adno,sva);
868       ^~~~~~
869       execlp
870normp2.c: In function 'nprg2':
871normp2.c:217:53: warning: implicit declaration of function 'expimage'; did you mean 'image'? [-Wimplicit-function-declaration]
872   { bpt=gbase[adno]; imbpt= (sym) ? expcp[*expcp] : expimage(bpt);
873                                                     ^~~~~~~~
874                                                     image
875normp2.c:251:11: warning: implicit declaration of function 'intbase'; did you mean 'printbaselo'? [-Wimplicit-function-declaration]
876     { if (intbase(imbpt,ntct,&sth,&nbh,hbase,lorbh,svhptr)== -1) return(-1);
877           ^~~~~~~
878           printbaselo
879normp2.c:255:9: warning: implicit declaration of function 'allorbs'; did you mean 'llabs'? [-Wimplicit-function-declaration]
880         allorbs(test,imorno[orhct]);   ptr=hlorb[orhct];
881         ^~~~~~~
882         llabs
883normp2.c:309:43: warning: implicit declaration of function 'backimage'; did you mean 'image'? [-Wimplicit-function-declaration]
884           for (j=1;j<=npt;j++) pptr[k][j]=backimage(j);
885                                           ^~~~~~~~~
886                                           image
887gcc -c -O -fno-builtin chb.c
888gcc -O -fno-builtin -o ..//..//bin/x86_64-pc-linux-gnu-default64/normrun normd.o normp1.o normp2.o \
889chb.o permfns.o morepermfns.o
890gcc -c -O -fno-builtin conpdcd.c
891conpdcd.c: In function 'main':
892conpdcd.c:75:7: warning: implicit declaration of function 'cnprg1' [-Wimplicit-function-declaration]
893   if (cnprg1()== -1) exit(1);
894       ^~~~~~
895conpdcd.c:76:24: warning: implicit declaration of function 'cnprg2' [-Wimplicit-function-declaration]
896   if (hg || cong)  if (cnprg2()== -1) exit(1);
897                        ^~~~~~
898gcc -c -O -fno-builtin conpdc1.c
899gcc -c -O -fno-builtin conpdc2.c
900conpdc2.c: In function 'cnprg2':
901conpdc2.c:29:33: warning: implicit declaration of function 'addsvf' [-Wimplicit-function-declaration]
902       { expp[j]=pst; ucp=lcp-1; addsvf(j,p);
903                                 ^~~~~~
904conpdc2.c:30:37: warning: implicit declaration of function 'image' [-Wimplicit-function-declaration]
905         for (k=1;k<=npt;k++) pst[k]=image(k); pst+=npt;
906                                     ^~~~~
907conpdc2.c:50:21: warning: implicit declaration of function 'advance' [-Wimplicit-function-declaration]
908       { if (cind>1) advance(); lcp=conp; trptr=0;
909                     ^~~~~~~
910conpdc2.c:58:18: warning: implicit declaration of function 'addsvb' [-Wimplicit-function-declaration]
911             else addsvb(i,svgptr[bno]);
912                  ^~~~~~
913gcc -O -fno-builtin -o ..//..//bin/x86_64-pc-linux-gnu-default64/conrun conpdcd.o conpdc1.o conpdc2.o
914gcc -c -O -fno-builtin pcd.c
915pcd.c: In function 'main':
916pcd.c:46:7: warning: implicit declaration of function 'pcprog'; did you mean 'perror'? [-Wimplicit-function-declaration]
917   if (pcprog()== -1) exit(1);
918       ^~~~~~
919       perror
920gcc -c -O -fno-builtin pcp.c
921pcp.c: In function 'pcprog':
922pcp.c:98:23: warning: implicit declaration of function 'firstgen'; did you mean 'fwrite'? [-Wimplicit-function-declaration]
923         setfixb(pnf); firstgen(pnf,&hgen,&coeff); k=hgen;
924                       ^~~~~~~~
925                       fwrite
926pcp.c:148:11: warning: implicit declaration of function 'setpinv'; did you mean 'setenv'? [-Wimplicit-function-declaration]
927   exp=np; setpinv();
928           ^~~~~~~
929           setenv
930pcp.c:168:10: warning: implicit declaration of function 'express' [-Wimplicit-function-declaration]
931     hgen=express(pnf,rel,nwt);
932          ^~~~~~~
933gcc -c -O -fno-builtin pcscfns.c
934pcscfns.c: In function 'firstgen':
935pcscfns.c:20:23: warning: implicit declaration of function 'addsv' [-Wimplicit-function-declaration]
936   for (i=1;i<=nb;i++) addsv(image(p[base[i]]),svptr[i]);
937                       ^~~~~
938pcscfns.c:20:29: warning: implicit declaration of function 'image' [-Wimplicit-function-declaration]
939   for (i=1;i<=nb;i++) addsv(image(p[base[i]]),svptr[i]);
940                             ^~~~~
941pcscfns.c: In function 'express':
942pcscfns.c:49:5: warning: implicit declaration of function 'invert'; did you mean 'index'? [-Wimplicit-function-declaration]
943     invert(p,ip); h=hgen-1;
944     ^~~~~~
945     index
946gcc -O -fno-builtin -o ..//..//bin/x86_64-pc-linux-gnu-default64/pcrun pcd.o pcp.o permfns.o pcscfns.o
947gcc -c -O -fno-builtin scd.c
948scd.c: In function 'main':
949scd.c:57:7: warning: implicit declaration of function 'scprog' [-Wimplicit-function-declaration]
950   if (scprog() == -1) exit(1);
951       ^~~~~~
952gcc -c -O -fno-builtin scp.c
953scp.c: In function 'scprog':
954scp.c:63:9: warning: implicit declaration of function 'rsgp' [-Wimplicit-function-declaration]
955     if (rsgp()== -1) return(-1);
956         ^~~~
957scp.c:78:36: warning: implicit declaration of function 'setpinv'; did you mean 'setenv'? [-Wimplicit-function-declaration]
958   op=fopen(outf,"w"); pm1=prime-1; setpinv();
959                                    ^~~~~~~
960                                    setenv
961scp.c:218:16: warning: implicit declaration of function 'expint'; did you mean 'exit'? [-Wimplicit-function-declaration]
962         if ((n=expint(intexp+1-i,intexp+1-j,nwt))>0) goto restart;
963                ^~~~~~
964                exit
965scp.c:236:7: warning: implicit declaration of function 'express' [-Wimplicit-function-declaration]
966       express(tp,rel,0); l= *rel;
967       ^~~~~~~
968scp.c: In function 'rsgp':
969scp.c:284:3: warning: implicit declaration of function 'seeknln' [-Wimplicit-function-declaration]
970   seeknln(); seeknln(); seeknln();
971   ^~~~~~~
972scp.c: In function 'expint':
973scp.c:304:5: warning: implicit declaration of function 'firstgen'; did you mean 'fwrite'? [-Wimplicit-function-declaration]
974   { firstgen(tp,&hgen,&coeff);
975     ^~~~~~~~
976     fwrite
977gcc -O -fno-builtin -o ..//..//bin/x86_64-pc-linux-gnu-default64/scrun scd.o scp.o permfns.o pcscfns.o
978gcc -c -O -fno-builtin slg.c
979gcc -O -fno-builtin -o ..//..//bin/x86_64-pc-linux-gnu-default64/selgen slg.o
980gcc -c -O -fno-builtin mcd.c
981mcd.c: In function 'main':
982mcd.c:49:7: warning: implicit declaration of function 'mcprog' [-Wimplicit-function-declaration]
983   if (mcprog()== -1) exit(1);
984       ^~~~~~
985mcd.c:67:9: warning: implicit declaration of function 'conprog' [-Wimplicit-function-declaration]
986     if (conprog(con)== -1) exit(1);
987         ^~~~~~~
988gcc -c -O -fno-builtin mcp.c
989mcp.c: In function 'mcprog':
990mcp.c:23:3: warning: implicit declaration of function 'setpinv'; did you mean 'setenv'? [-Wimplicit-function-declaration]
991   setpinv();
992   ^~~~~~~
993   setenv
994mcp.c:36:5: warning: implicit declaration of function 'readmat'; did you mean 'read'? [-Wimplicit-function-declaration]
995   { readmat(mat[i]);
996     ^~~~~~~
997     read
998mcp.c:37:9: warning: implicit declaration of function 'inv'; did you mean 'link'? [-Wimplicit-function-declaration]
999     if (inv(mat[i],mat[i+1]) == -1) return(-1);
1000         ^~~
1001         link
1002mcp.c:54:5: warning: implicit declaration of function 'prod'; did you mean 'pread'? [-Wimplicit-function-declaration]
1003     prod(cp,mat[nm2-1]); inv(mat[nm2-1],mat[nm2]);
1004     ^~~~
1005     pread
1006mcp.c:76:3: warning: implicit declaration of function 'readbaselo' [-Wimplicit-function-declaration]
1007   readbaselo(nb,base,lorb); readpsv(0,nb,nperms,svptr);
1008   ^~~~~~~~~~
1009mcp.c:76:29: warning: implicit declaration of function 'readpsv'; did you mean 'read'? [-Wimplicit-function-declaration]
1010   readbaselo(nb,base,lorb); readpsv(0,nb,nperms,svptr);
1011                             ^~~~~~~
1012                             read
1013mcp.c: In function 'conprog':
1014mcp.c:117:27: warning: implicit declaration of function 'trans'; did you mean 'srand'? [-Wimplicit-function-declaration]
1015   { for (i=0;i<nm2;i+=2) {trans(mat[i],mat[i+1]); inv(mat[i+1],mat[i]);}}
1016                           ^~~~~
1017                           srand
1018mcp.c:141:30: warning: implicit declaration of function 'readvec'; did you mean 'read'? [-Wimplicit-function-declaration]
1019   { for (i=nperms;i>=1;i--) {readvec(pptr[nm2+i],0); seeknln(); }
1020                              ^~~~~~~
1021                              read
1022mcp.c:149:27: warning: implicit declaration of function 'addsv' [-Wimplicit-function-declaration]
1023       for (j=1;j<=nb;j++) addsv(image(p[base[j]]),svptr[j]);
1024                           ^~~~~
1025mcp.c:149:33: warning: implicit declaration of function 'image' [-Wimplicit-function-declaration]
1026       for (j=1;j<=nb;j++) addsv(image(p[base[j]]),svptr[j]);
1027                                 ^~~~~
1028mcp.c:175:15: warning: implicit declaration of function 'comm' [-Wimplicit-function-declaration]
1029             { comm(cv,cc,mat[nm2+j]);
1030               ^~~~
1031mcp.c:193:5: warning: implicit declaration of function 'printmat'; did you mean 'printf'? [-Wimplicit-function-declaration]
1032     printmat(cbm);
1033     ^~~~~~~~
1034     printf
1035mcp.c:210:10: warning: implicit declaration of function 'cbdef' [-Wimplicit-function-declaration]
1036       id=cbdef(nm2+1,nm2+nperms,lmat+1,d1,d2,wt,&class);
1037          ^~~~~
1038gcc -c -O -fno-builtin matfns.c
1039gcc -O -fno-builtin -o ..//..//bin/x86_64-pc-linux-gnu-default64/matcalc mcd.o mcp.o matfns.o
1040gcc -c -O -fno-builtin nqmd.c
1041nqmd.c: In function 'main':
1042nqmd.c:52:7: warning: implicit declaration of function 'nqmprog' [-Wimplicit-function-declaration]
1043   if (nqmprog()== -1) exit(1);
1044       ^~~~~~~
1045gcc -c -O -fno-builtin nqmp.c
1046nqmp.c: In function 'nqmprog':
1047nqmp.c:38:7: warning: implicit declaration of function 'ingp' [-Wimplicit-function-declaration]
1048   if (ingp() == -1) {fprintf(stderr,"Input error.\n"); return(-1); }
1049       ^~~~
1050nqmp.c:59:11: warning: implicit declaration of function 'intgen'; did you mean 'index'? [-Wimplicit-function-declaration]
1051       if (intgen(j,i)== -1) return(-1);
1052           ^~~~~~
1053           index
1054nqmp.c:64:13: warning: implicit declaration of function 'assoc' [-Wimplicit-function-declaration]
1055         if (assoc(j,k,l)) if (subrel(j,i)== -1) return(-1);
1056             ^~~~~
1057nqmp.c:64:31: warning: implicit declaration of function 'subrel'; did you mean 'sbrk'? [-Wimplicit-function-declaration]
1058         if (assoc(j,k,l)) if (subrel(j,i)== -1) return(-1);
1059                               ^~~~~~
1060                               sbrk
1061nqmp.c:67:34: warning: implicit declaration of function 'prnrel'; did you mean 'profil'? [-Wimplicit-function-declaration]
1062       { if (assoc(j,i,i)) if ((l=prnrel(0))== -1) goto nextcl;
1063                                  ^~~~~~
1064                                  profil
1065nqmp.c:122:11: warning: implicit declaration of function 'zero'; did you mean 'bzero'? [-Wimplicit-function-declaration]
1066           zero(nexpnt,enexpnt); p=pf-2; wc=wf-2;
1067           ^~~~
1068           bzero
1069nqmp.c:123:27: warning: implicit declaration of function 'enter'; did you mean 'ecvt_r'? [-Wimplicit-function-declaration]
1070           while (p>=ps) { enter(imintg[*p],-*(p+1),tlintg[*p]); p-=2; }
1071                           ^~~~~
1072                           ecvt_r
1073nqmp.c:126:31: warning: implicit declaration of function 'collect'; did you mean 'calloc'? [-Wimplicit-function-declaration]
1074           zero(expnt,eexpnt); collect(wc,wf,1);
1075                               ^~~~~~~
1076                               calloc
1077nqmp.c:213:3: warning: implicit declaration of function 'outgp' [-Wimplicit-function-declaration]
1078   outgp();
1079   ^~~~~
1080gcc -c -O -fno-builtin nqmfns.c
1081gcc -O -fno-builtin -o ..//..//bin/x86_64-pc-linux-gnu-default64/nqmrun nqmd.o nqmp.o nqmfns.o
1082gcc -c -O -fno-builtin nqd.c
1083nqd.c: In function 'main':
1084nqd.c:88:5: warning: implicit declaration of function 'nqprog' [-Wimplicit-function-declaration]
1085   n=nqprog();
1086     ^~~~~~
1087gcc -c -O -fno-builtin nqp1.c
1088nqp1.c: In function 'nqprog':
1089nqp1.c:52:5: warning: implicit declaration of function 'setpinv'; did you mean 'setenv'? [-Wimplicit-function-declaration]
1090     setpinv(); calcfm(0); return(0);
1091     ^~~~~~~
1092     setenv
1093nqp1.c:52:16: warning: implicit declaration of function 'calcfm'; did you mean 'ualarm'? [-Wimplicit-function-declaration]
1094     setpinv(); calcfm(0); return(0);
1095                ^~~~~~
1096                ualarm
1097nqp1.c:54:7: warning: implicit declaration of function 'rdmats'; did you mean 'rpmatch'? [-Wimplicit-function-declaration]
1098   if (rdmats()== -1) return(-1);
1099       ^~~~~~
1100       rpmatch
1101nqp1.c:79:35: warning: implicit declaration of function 'intmats' [-Wimplicit-function-declaration]
1102       if (ip==0) i=1; else if ((i=intmats())== -1) return(-1);
1103                                   ^~~~~~~
1104nqp1.c:85:42: warning: implicit declaration of function 'ingp' [-Wimplicit-function-declaration]
1105         {strcpy(inf1,inf0); stage=2; if (ingp(1)== -1) return(-1); onng=nng;}
1106                                          ^~~~
1107nqp1.c:126:11: warning: implicit declaration of function 'spact' [-Wimplicit-function-declaration]
1108       if (spact()== -1) return(-1);
1109           ^~~~~
1110nqp1.c:135:7: warning: implicit declaration of function 'intact'; did you mean 'linkat'? [-Wimplicit-function-declaration]
1111     i=intact();
1112       ^~~~~~
1113       linkat
1114nqp1.c:145:28: warning: implicit declaration of function 'readmat'; did you mean 'read'? [-Wimplicit-function-declaration]
1115     for (i=1;i<=ngens;i++) readmat(mat[i]);
1116                            ^~~~~~~
1117                            read
1118nqp1.c:163:17: warning: implicit declaration of function 'comprels' [-Wimplicit-function-declaration]
1119   if (crel) if (comprels()== -1) return(-1);
1120                 ^~~~~~~~
1121nqp1.c: In function 'intmats':
1122nqp1.c:237:19: warning: implicit declaration of function 'prod'; did you mean 'pread'? [-Wimplicit-function-declaration]
1123       rpb-=(l+1); prod(cp,mat[ct+ngens]);
1124                   ^~~~
1125                   pread
1126nqp1.c:257:7: warning: implicit declaration of function 'cbdef' [-Wimplicit-function-declaration]
1127   if (cbdef(1,ct,cbno,sd1,sd2,swt,&matcl))
1128       ^~~~~
1129nqp1.c:262:19: warning: implicit declaration of function 'inv'; did you mean 'link'? [-Wimplicit-function-declaration]
1130     cbno2=cbno+2; inv(cbm,mat[cbno+1]); newmat=mat[cbno2];
1131                   ^~~
1132                   link
1133nqp1.c: In function 'calcfm':
1134nqp1.c:297:46: warning: implicit declaration of function 'intgen'; did you mean 'index'? [-Wimplicit-function-declaration]
1135           if (wt[i]==1 && wt[j]==(cl-1)) if (intgen(j,i)== -1) return(-1);
1136                                              ^~~~~~
1137                                              index
1138nqp1.c:305:17: warning: implicit declaration of function 'assoc' [-Wimplicit-function-declaration]
1139             if (assoc(j,k,l)) if (subrel(j,i)== -1) return(-1);
1140                 ^~~~~
1141nqp1.c:305:35: warning: implicit declaration of function 'subrel'; did you mean 'sbrk'? [-Wimplicit-function-declaration]
1142             if (assoc(j,k,l)) if (subrel(j,i)== -1) return(-1);
1143                                   ^~~~~~
1144                                   sbrk
1145nqp1.c:311:20: warning: implicit declaration of function 'prnrel'; did you mean 'profil'? [-Wimplicit-function-declaration]
1146           { if ((l=prnrel())== 0) goto nextcl; if (l== -1) return(-1);}
1147                    ^~~~~~
1148                    profil
1149nqp1.c:332:5: warning: implicit declaration of function 'outgp' [-Wimplicit-function-declaration]
1150     outgp();
1151     ^~~~~
1152gcc -c -O -fno-builtin nqp2.c
1153nqp2.c: In function 'spact':
1154nqp2.c:25:7: warning: implicit declaration of function 'ingp' [-Wimplicit-function-declaration]
1155   if (ingp(inp) == -1) return(-1);
1156       ^~~~
1157nqp2.c:41:9: warning: implicit declaration of function 'inv'; did you mean 'link'? [-Wimplicit-function-declaration]
1158     if (inv(mat[i],mat[facexp+i]) == -1) return(-1);
1159         ^~~
1160         link
1161nqp2.c:55:5: warning: implicit declaration of function 'prod'; did you mean 'pread'? [-Wimplicit-function-declaration]
1162     prod(cp,mat[i]);
1163     ^~~~
1164     pread
1165nqp2.c:61:29: warning: implicit declaration of function 'printmat'; did you mean 'printf'? [-Wimplicit-function-declaration]
1166     for (i=1;i<=facexp;i++) printmat(mat[i]);
1167                             ^~~~~~~~
1168                             printf
1169nqp2.c:72:33: warning: implicit declaration of function 'comm' [-Wimplicit-function-declaration]
1170     for (j=1;j<=facexp;j++) if (comm(v1,v2,mat[j]))
1171                                 ^~~~
1172nqp2.c:89:13: warning: implicit declaration of function 'intgen'; did you mean 'index'? [-Wimplicit-function-declaration]
1173       { if (intgen(i,fg)== -1) return(-1);
1174             ^~~~~~
1175             index
1176nqp2.c:99:17: warning: implicit declaration of function 'assoc' [-Wimplicit-function-declaration]
1177           { if (assoc(i,d1[fg],d2[fg]))
1178                 ^~~~~
1179nqp2.c:100:17: warning: implicit declaration of function 'subrel'; did you mean 'sbrk'? [-Wimplicit-function-declaration]
1180             if (subrel(i,fg)== -1) return(-1);
1181                 ^~~~~~
1182                 sbrk
1183nqp2.c:116:20: warning: implicit declaration of function 'prnrel'; did you mean 'profil'? [-Wimplicit-function-declaration]
1184           { if ((l=prnrel())==0) goto nextcl; if (l== -1) return(-1); }
1185                    ^~~~~~
1186                    profil
1187nqp2.c:121:5: warning: implicit declaration of function 'bgc' [-Wimplicit-function-declaration]
1188     bgc(); rsp=rpb-rel+1;
1189     ^~~
1190nqp2.c:151:52: warning: implicit declaration of function 'nchg' [-Wimplicit-function-declaration]
1191     { l=prnrel(); if (l== -1) return(-1); if (l>1) nchg(); }
1192                                                    ^~~~
1193nqp2.c:160:5: warning: implicit declaration of function 'outgp' [-Wimplicit-function-declaration]
1194     outgp();
1195     ^~~~~
1196nqp2.c: In function 'nchg':
1197nqp2.c:179:7: warning: implicit declaration of function 'expand'; did you mean 'srand'? [-Wimplicit-function-declaration]
1198     { expand(p,rpf,onng); p=rpf; n=prime-n; q=p+onng; v1=nexpnt+1;
1199       ^~~~~~
1200       srand
1201nqp2.c:195:17: warning: implicit declaration of function 'compress' [-Wimplicit-function-declaration]
1202         *p=len; compress(p,r,onng);
1203                 ^~~~~~~~
1204nqp2.c: In function 'intact':
1205nqp2.c:276:3: warning: implicit declaration of function 'readmat'; did you mean 'read'? [-Wimplicit-function-declaration]
1206   readmat(mat[cbno+2]);
1207   ^~~~~~~
1208   read
1209nqp2.c:286:17: warning: implicit declaration of function 'zero'; did you mean 'bzero'? [-Wimplicit-function-declaration]
1210       b=sd2[i]; zero(nexpnt,enexpnt);
1211                 ^~~~
1212                 bzero
1213nqp2.c:289:23: warning: implicit declaration of function 'entvec' [-Wimplicit-function-declaration]
1214         while (q>p) { entvec(npcb[*q-intexp],bim[*q-intexp],-*(q+1)); q-=2;}
1215                       ^~~~~~
1216nqp2.c:292:27: warning: implicit declaration of function 'enter'; did you mean 'ecvt_r'? [-Wimplicit-function-declaration]
1217       entvec(null,ia,-1); enter(ib,-1); entvec(null,ia,1); enter(ib,1);
1218                           ^~~~~
1219                           ecvt_r
1220nqp2.c:293:27: warning: implicit declaration of function 'collect'; did you mean 'calloc'? [-Wimplicit-function-declaration]
1221       zero(expnt,eexpnt); collect(wc,wf,1);
1222                           ^~~~~~~
1223                           calloc
1224gcc -c -O -fno-builtin nqp3.c
1225nqp3.c: In function 'comprels':
1226nqp3.c:25:7: warning: implicit declaration of function 'expand'; did you mean 'srand'? [-Wimplicit-function-declaration]
1227     { expand(q,rpf,onng); if ((l=rpf[i])!=0) p[j]=prime-l; }
1228       ^~~~~~
1229       srand
1230nqp3.c:70:3: warning: implicit declaration of function 'readmat'; did you mean 'read'? [-Wimplicit-function-declaration]
1231   readmat(mat[1]); readmat(mat[2]);
1232   ^~~~~~~
1233   read
1234nqp3.c:71:28: warning: implicit declaration of function 'prod'; did you mean 'pread'? [-Wimplicit-function-declaration]
1235   *cp=2; cp[1]=2; cp[2]=1; prod(cp,mat[3]);
1236                            ^~~~
1237                            pread
1238nqp3.c:72:3: warning: implicit declaration of function 'inv'; did you mean 'link'? [-Wimplicit-function-declaration]
1239   inv(mat[3],mat[2]); trans(mat[2],mat[1]);
1240   ^~~
1241   link
1242nqp3.c:72:23: warning: implicit declaration of function 'trans'; did you mean 'srand'? [-Wimplicit-function-declaration]
1243   inv(mat[3],mat[2]); trans(mat[2],mat[1]);
1244                       ^~~~~
1245                       srand
1246nqp3.c:87:5: warning: implicit declaration of function 'zero'; did you mean 'bzero'? [-Wimplicit-function-declaration]
1247     zero(expnt,eexpnt);
1248     ^~~~
1249     bzero
1250nqp3.c:96:7: warning: implicit declaration of function 'collect'; did you mean 'calloc'? [-Wimplicit-function-declaration]
1251       collect(wc,wf,1);
1252       ^~~~~~~
1253       calloc
1254nqp3.c:115:5: warning: implicit declaration of function 'im' [-Wimplicit-function-declaration]
1255     im(v1,v2,cbmat);
1256     ^~
1257gcc -c -O -fno-builtin nqfns.c
1258nqfns.c: In function 'intgen':
1259nqfns.c:476:19: warning: implicit declaration of function 'bgc' [-Wimplicit-function-declaration]
1260     if (wsp>marg) bgc(); else return(-1);
1261                   ^~~
1262gcc -O -fno-builtin -o ..//..//bin/x86_64-pc-linux-gnu-default64/nqrun nqd.o nqp1.o nqp2.o nqp3.o nqfns.o \
1263matfns.o
1264gcc -c -O -fno-builtin grd.c
1265grd.c: In function 'main':
1266grd.c:44:7: warning: implicit declaration of function 'grprog' [-Wimplicit-function-declaration]
1267   if (grprog()== -1) exit(1);
1268       ^~~~~~
1269gcc -c -O -fno-builtin grp.c
1270grp.c: In function 'grprog':
1271grp.c:89:11: warning: implicit declaration of function 'addrel'; did you mean 'addsv'? [-Wimplicit-function-declaration]
1272       if (addrel()== -1) return(-1);
1273           ^~~~~~
1274           addsv
1275grp.c:113:28: warning: implicit declaration of function 'scanrel'; did you mean 'scanf'? [-Wimplicit-function-declaration]
1276    if (RD(ccos,scanno)==0) scanrel();
1277                            ^~~~~~~
1278                            scanf
1279grp.c: In function 'scanrel':
1280grp.c:212:31: warning: implicit declaration of function 'coinc' [-Wimplicit-function-declaration]
1281   if (comp) { if (fcos!=bcos) coinc(fcos,bcos); WD(ccos,scanno); return(0); }
1282                               ^~~~~
1283gcc -O -fno-builtin -o ..//..//bin/x86_64-pc-linux-gnu-default64/grrun grd.o grp.o permfns.o
1284gcc -c -O -fno-builtin extpd.c
1285extpd.c: In function 'main':
1286extpd.c:45:7: warning: implicit declaration of function 'extpprog' [-Wimplicit-function-declaration]
1287   if (extpprog()==-1) exit(1);
1288       ^~~~~~~~
1289gcc -c -O -fno-builtin exa.c
1290exa.c: In function 'extpprog':
1291exa.c:59:5: warning: implicit declaration of function 'setpinv'; did you mean 'setenv'? [-Wimplicit-function-declaration]
1292     setpinv();
1293     ^~~~~~~
1294     setenv
1295exa.c:69:28: warning: implicit declaration of function 'readmat'; did you mean 'readpsv'? [-Wimplicit-function-declaration]
1296     for (i=0;i<np2;i+=2) { readmat(mat[i]); inv(mat[i],mat[i+1]);}
1297                            ^~~~~~~
1298                            readpsv
1299exa.c:69:45: warning: implicit declaration of function 'inv'; did you mean 'link'? [-Wimplicit-function-declaration]
1300     for (i=0;i<np2;i+=2) { readmat(mat[i]); inv(mat[i],mat[i+1]);}
1301                                             ^~~
1302                                             link
1303exa.c:164:13: warning: implicit declaration of function 'scanrel'; did you mean 'scanf'? [-Wimplicit-function-declaration]
1304       { if (scanrel()== -1)  return(-1);
1305             ^~~~~~~
1306             scanf
1307exa.c:195:29: warning: implicit declaration of function 'gc'; did you mean 'gcvt'? [-Wimplicit-function-declaration]
1308     if (bno>1) { maxcos=lo; gc(); ocst=cst; }
1309                             ^~
1310                             gcvt
1311gcc -c -O -fno-builtin exb.c
1312exb.c: In function 'scanrel':
1313exb.c:24:26: warning: implicit declaration of function 'action'; did you mean 'atol'? [-Wimplicit-function-declaration]
1314   if (mult==0 && ccos>1) action(p,def[ccos]);
1315                          ^~~~~~
1316                          atol
1317exb.c:29:9: warning: implicit declaration of function 'concat'; did you mean 'linkat'? [-Wimplicit-function-declaration]
1318     if (concat(wd1,coeff[rel[i]][fcos])== -1) return(-1);
1319         ^~~~~~
1320         linkat
1321exb.c:33:25: warning: implicit declaration of function 'coinc' [-Wimplicit-function-declaration]
1322   { if (fcos!=bcos) esc=coinc(fcos,bcos);
1323                         ^~~~~
1324exb.c:34:25: warning: implicit declaration of function 'concheck' [-Wimplicit-function-declaration]
1325     else if (conch) if (concheck()== -1) return(-1);
1326                         ^~~~~~~~
1327exb.c:47:15: warning: implicit declaration of function 'ainvb' [-Wimplicit-function-declaration]
1328           if (ainvb(wd1,wd2,wd3)== -1) return(-1);
1329               ^~~~~
1330exb.c:48:23: warning: implicit declaration of function 'reduce'; did you mean 'revoke'? [-Wimplicit-function-declaration]
1331           if (*wd3>2) reduce(wd3);
1332                       ^~~~~~
1333                       revoke
1334exb.c:49:15: warning: implicit declaration of function 'comp'; did you mean 'bcmp'? [-Wimplicit-function-declaration]
1335           if (comp(wd3,coeff[l]+fcos)== -1) return(-1);
1336               ^~~~
1337               bcmp
1338exb.c:50:11: warning: implicit declaration of function 'invwd' [-Wimplicit-function-declaration]
1339           invwd(wd3,wd2);
1340           ^~~~~
1341exb.c: In function 'coinc':
1342exb.c:94:7: warning: implicit declaration of function 'compb' [-Wimplicit-function-declaration]
1343   if (compb(wd3,cco+hc)== -1) return(-1);
1344       ^~~~~
1345exb.c:105:9: warning: implicit declaration of function 'expand'; did you mean 'srand'? [-Wimplicit-function-declaration]
1346       { expand(wd1,coeff[i][hc]);
1347         ^~~~~~
1348         srand
1349gcc -c -O -fno-builtin exc.c
1350exc.c: In function 'concat':
1351exc.c:134:20: warning: implicit declaration of function 'reduce'; did you mean 'revoke'? [-Wimplicit-function-declaration]
1352   if (*a>mwl2) if (reduce(a)== -1) return(-1);
1353                    ^~~~~~
1354                    revoke
1355exc.c: In function 'reduce':
1356exc.c:216:27: warning: implicit declaration of function 'addsv' [-Wimplicit-function-declaration]
1357   for (i=bno+1;i<=nb;i++) addsv(image(base[i]),svptr[i]);
1358                           ^~~~~
1359exc.c:216:33: warning: implicit declaration of function 'image' [-Wimplicit-function-declaration]
1360   for (i=bno+1;i<=nb;i++) addsv(image(base[i]),svptr[i]);
1361                                 ^~~~~
1362gcc -O -fno-builtin -o ..//..//bin/x86_64-pc-linux-gnu-default64/extprun extpd.o exa.o exb.o exc.o \
1363permfns.o matfns.o
1364gcc -c -O -fno-builtin crd.c
1365crd.c: In function 'main':
1366crd.c:45:7: warning: implicit declaration of function 'crprog1' [-Wimplicit-function-declaration]
1367   if (crprog1()== -1) exit(1);
1368       ^~~~~~~
1369crd.c:46:7: warning: implicit declaration of function 'crprog2' [-Wimplicit-function-declaration]
1370   if (crprog2()== -1) exit(1);;
1371       ^~~~~~~
1372gcc -c -O -fno-builtin crp1.c
1373gcc -c -O -fno-builtin crp2.c
1374crp2.c: In function 'crprog2':
1375crp2.c:31:5: warning: implicit declaration of function 'setpinv'; did you mean 'setenv'? [-Wimplicit-function-declaration]
1376     setpinv();
1377     ^~~~~~~
1378     setenv
1379crp2.c:40:28: warning: implicit declaration of function 'readmat'; did you mean 'read'? [-Wimplicit-function-declaration]
1380     for (i=0;i<nph2;i+=2) {readmat(mat[i]); inv(mat[i],mat[i+1]); }
1381                            ^~~~~~~
1382                            read
1383crp2.c:40:45: warning: implicit declaration of function 'inv'; did you mean 'link'? [-Wimplicit-function-declaration]
1384     for (i=0;i<nph2;i+=2) {readmat(mat[i]); inv(mat[i],mat[i+1]); }
1385                                             ^~~
1386                                             link
1387crp2.c:130:13: warning: implicit declaration of function 'scan'; did you mean 'scanf'? [-Wimplicit-function-declaration]
1388       { if (scan(k,&l2)== -1) return(-1);
1389             ^~~~
1390             scanf
1391crp2.c: In function 'scan':
1392crp2.c:173:9: warning: implicit declaration of function 'action'; did you mean 'atol'? [-Wimplicit-function-declaration]
1393       { action(v1,conco);
1394         ^~~~~~
1395         atol
1396gcc -O -fno-builtin -o ..//..//bin/x86_64-pc-linux-gnu-default64/crrun crd.o crp1.o crp2.o matfns.o
1397gcc -c -O -fno-builtin readrels.c
1398gcc -O -fno-builtin -o ..//..//bin/x86_64-pc-linux-gnu-default64/readrels readrels.o
1399cp cohomology.gap ..//..//bin/x86_64-pc-linux-gnu-default64/cohomology.gap
1400chmod +x ..//..//bin/x86_64-pc-linux-gnu-default64/cohomology.gap
1401cp execcmd.gap ..//..//bin/x86_64-pc-linux-gnu-default64/execcmd.gap
1402chmod +x ..//..//bin/x86_64-pc-linux-gnu-default64/execcmd.gap
1403cp calcpres.gap ..//..//bin/x86_64-pc-linux-gnu-default64/calcpres.gap
1404chmod +x ..//..//bin/x86_64-pc-linux-gnu-default64/calcpres.gap
1405make[5]: Leaving directory '/home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/src/pkg/cohomolo-1.6.7/standalone/progs.d'
1406make[4]: Leaving directory '/home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/src/pkg/cohomolo-1.6.7'
1407bin/ -> /home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/inst/home/martin/sage-develop/local/lib/gap/pkg/cohomolo-1.6.7
1408make[4]: Entering directory '/home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/src/pkg/cohomolo-1.6.7'
1409make[4]: warning: -jN forced in submake: disabling jobserver mode.
1410cd standalone/progs.d; make clean
1411make[5]: Entering directory '/home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/src/pkg/cohomolo-1.6.7/standalone/progs.d'
1412/bin/rm -f *.o
1413make[5]: Leaving directory '/home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/src/pkg/cohomolo-1.6.7/standalone/progs.d'
1414make[4]: Leaving directory '/home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0/src/pkg/cohomolo-1.6.7'
1415********************************************************************************
1416Error: source file/directory bin does not exist
1417********************************************************************************
1418
1419real    0m39.613s
1420user    0m13.278s
1421sys     0m3.444s
1422************************************************************************
1423Error installing package gap_packages-4.10.0
1424************************************************************************
1425Please email sage-devel (http://groups.google.com/group/sage-devel)
1426explaining the problem and including the log file
1427  /home/martin/sage-develop/logs/pkgs/gap_packages-4.10.0.log
1428Describe your computer, operating system, etc.
1429If you want to try to fix the problem yourself, *don't* just cd to
1430/home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0 and type 'make' or whatever is appropriate.
1431Instead, the following commands setup all environment variables
1432correctly and load a subshell for you to debug the error:
1433  (cd '/home/martin/sage-develop/local/var/tmp/sage/build/gap_packages-4.10.0' && '/home/martin/sage-develop/sage' --sh)
1434When you are done debugging, you can type "exit" to leave the subshell.
1435************************************************************************