Ticket #24902: deformation-d05941b.log

File deformation-d05941b.log, 8.0 KB (added by vdelecroix, 3 years ago)
Line 
1Found local metadata for deformation-d05941b
2Attempting to download package deformation-d05941b.tar.bz2 from mirrors
3http://www-ftp.lip6.fr/pub/math/sagemath/spkg/upstream/deformation/deformation-d05941b.tar.bz2
4[......................................................................]
5deformation-d05941b
6====================================================
7Setting up build directory for deformation-d05941b
8Finished extraction
9No patch files found in ../patches
10****************************************************
11Host system:
12Linux mangouste 4.14.15-1-ARCH #1 SMP PREEMPT Tue Jan 23 21:49:25 UTC 2018 x86_64 GNU/Linux
13****************************************************
14C compiler: gcc
15C compiler version:
16Using built-in specs.
17COLLECT_GCC=/usr/bin/gcc
18COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-pc-linux-gnu/7.3.0/lto-wrapper
19Target: x86_64-pc-linux-gnu
20Configured with: /build/gcc/src/gcc/configure --prefix=/usr --libdir=/usr/lib --libexecdir=/usr/lib --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=https://bugs.archlinux.org/ --enable-languages=c,c++,ada,fortran,go,lto,objc,obj-c++ --enable-shared --enable-threads=posix --enable-libmpx --with-system-zlib --with-isl --enable-__cxa_atexit --disable-libunwind-exceptions --enable-clocale=gnu --disable-libstdcxx-pch --disable-libssp --enable-gnu-unique-object --enable-linker-build-id --enable-lto --enable-plugin --enable-install-libiberty --with-linker-hash-style=gnu --enable-gnu-indirect-function --enable-multilib --disable-werror --enable-checking=release --enable-default-pie --enable-default-ssp
21Thread model: posix
22gcc version 7.3.0 (GCC)
23****************************************************
24FLINT_LIB_DIR set to /opt/sage/local/lib
25FLINT_INC_DIR set to /opt/sage/local/include
26Configuring...x86_64-Linux
27Testing __builtin_popcountl...yes
28Testing native popcount...yes
29Testing __thread...yes
30DEFORMATION was successfully configured.
31make[2]: Entering directory '/opt/sage/local/var/tmp/sage/build/deformation-d05941b/src'
32make: symbol lookup error: /usr/lib/libguile-2.2.so.1: undefined symbol: GC_move_disappearing_link
33make[2]: *** [Makefile:155: library] Error 127
34make[2]: Leaving directory '/opt/sage/local/var/tmp/sage/build/deformation-d05941b/src'
35Error building deformation.
36
37real    0m0.111s
38user    0m0.081s
39sys     0m0.036s
40************************************************************************
41Error installing package deformation-d05941b
42************************************************************************
43Please email sage-devel (http://groups.google.com/group/sage-devel)
44explaining the problem and including the log file
45  /opt/sage/logs/pkgs/deformation-d05941b.log
46Describe your computer, operating system, etc.
47If you want to try to fix the problem yourself, *don't* just cd to
48/opt/sage/local/var/tmp/sage/build/deformation-d05941b and type 'make' or whatever is appropriate.
49Instead, the following commands setup all environment variables
50correctly and load a subshell for you to debug the error:
51  (cd '/opt/sage/local/var/tmp/sage/build/deformation-d05941b' && '/opt/sage/sage' --sh)
52When you are done debugging, you can type "exit" to leave the subshell.
53************************************************************************
54Found local metadata for deformation-d05941b
55Using cached file /opt/sage/upstream/deformation-d05941b.tar.bz2
56deformation-d05941b
57====================================================
58Setting up build directory for deformation-d05941b
59Finished extraction
60No patch files found in ../patches
61****************************************************
62Host system:
63Linux mangouste 4.14.15-1-ARCH #1 SMP PREEMPT Tue Jan 23 21:49:25 UTC 2018 x86_64 GNU/Linux
64****************************************************
65C compiler: gcc
66C compiler version:
67Using built-in specs.
68COLLECT_GCC=/usr/bin/gcc
69COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-pc-linux-gnu/7.3.0/lto-wrapper
70Target: x86_64-pc-linux-gnu
71Configured with: /build/gcc/src/gcc/configure --prefix=/usr --libdir=/usr/lib --libexecdir=/usr/lib --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=https://bugs.archlinux.org/ --enable-languages=c,c++,ada,fortran,go,lto,objc,obj-c++ --enable-shared --enable-threads=posix --enable-libmpx --with-system-zlib --with-isl --enable-__cxa_atexit --disable-libunwind-exceptions --enable-clocale=gnu --disable-libstdcxx-pch --disable-libssp --enable-gnu-unique-object --enable-linker-build-id --enable-lto --enable-plugin --enable-install-libiberty --with-linker-hash-style=gnu --enable-gnu-indirect-function --enable-multilib --disable-werror --enable-checking=release --enable-default-pie --enable-default-ssp
72Thread model: posix
73gcc version 7.3.0 (GCC)
74****************************************************
75FLINT_LIB_DIR set to /opt/sage/local/lib
76FLINT_INC_DIR set to /opt/sage/local/include
77Configuring...x86_64-Linux
78Testing __builtin_popcountl...yes
79Testing native popcount...yes
80Testing __thread...yes
81DEFORMATION was successfully configured.
82make[2]: Entering directory '/opt/sage/local/var/tmp/sage/build/deformation-d05941b/src'
83make[3]: Entering directory '/opt/sage/local/var/tmp/sage/build/deformation-d05941b/src'
84mkdir -p build/interfaces
85make[4]: Entering directory '/opt/sage/local/var/tmp/sage/build/deformation-d05941b/src/perm'
86    CC   ../build/perm/randtest.lo
87In file included from randtest.c:1:0:
88../perm.h:115:12: warning: '_perm_print' defined but not used [-Wunused-function]
89 static int _perm_print(const long * vec, long n)
90            ^~~~~~~~~~~
91../perm.h:100:12: warning: '_long_vec_print' defined but not used [-Wunused-function]
92 static int _long_vec_print(const long * vec, long len)
93            ^~~~~~~~~~~~~~~
94../perm.h:86:13: warning: '_perm_compose' defined but not used [-Wunused-function]
95 static void _perm_compose(long *res, const long *vec1, const long *vec2, long n)
96             ^~~~~~~~~~~~~
97../perm.h:56:13: warning: '_perm_inv' defined but not used [-Wunused-function]
98 static void _perm_inv(long *res, const long *vec, long n)
99             ^~~~~~~~~
100../perm.h:48:13: warning: '_perm_set_one' defined but not used [-Wunused-function]
101 static void _perm_set_one(long *vec, long n)
102             ^~~~~~~~~~~~~
103../perm.h:40:13: warning: '_perm_set' defined but not used [-Wunused-function]
104 static void _perm_set(long *res, const long *vec, long n)
105             ^~~~~~~~~
106../perm.h:33:13: warning: '_perm_clear' defined but not used [-Wunused-function]
107 static void _perm_clear(long * vec)
108             ^~~~~~~~~~~
109../perm.h:15:15: warning: '_perm_init' defined but not used [-Wunused-function]
110 static long * _perm_init(long n)
111               ^~~~~~~~~~
112    CC   ../build/perm/../perm.lo
113/usr/bin/ld: -r and -pie may not be used together
114collect2: error: ld returned 1 exit status
115make[4]: *** [../Makefile.subdirs:55: ../build/perm/../perm.lo] Error 1
116make[4]: Leaving directory '/opt/sage/local/var/tmp/sage/build/deformation-d05941b/src/perm'
117make[3]: *** [Makefile:125: libdeformation.so.0.0.0] Error 2
118make[3]: Leaving directory '/opt/sage/local/var/tmp/sage/build/deformation-d05941b/src'
119make[2]: *** [Makefile:155: library] Error 2
120make[2]: Leaving directory '/opt/sage/local/var/tmp/sage/build/deformation-d05941b/src'
121Error building deformation.
122
123real    0m0.203s
124user    0m0.168s
125sys     0m0.043s
126************************************************************************
127Error installing package deformation-d05941b
128************************************************************************
129Please email sage-devel (http://groups.google.com/group/sage-devel)
130explaining the problem and including the log file
131  /opt/sage/logs/pkgs/deformation-d05941b.log
132Describe your computer, operating system, etc.
133If you want to try to fix the problem yourself, *don't* just cd to
134/opt/sage/local/var/tmp/sage/build/deformation-d05941b and type 'make' or whatever is appropriate.
135Instead, the following commands setup all environment variables
136correctly and load a subshell for you to debug the error:
137  (cd '/opt/sage/local/var/tmp/sage/build/deformation-d05941b' && '/opt/sage/sage' --sh)
138When you are done debugging, you can type "exit" to leave the subshell.
139************************************************************************