Ticket #14067: sage_crash_SHRqxx.log

File sage_crash_SHRqxx.log, 13.0 KB (added by jdemeyer, 9 years ago)
Line 
1GNU gdb (GDB) 7.5.1
2Copyright (C) 2012 Free Software Foundation, Inc.
3License GPLv3+: GNU GPL version 3 or later <http://gnu.org/licenses/gpl.html>
4This is free software: you are free to change and redistribute it.
5There is NO WARRANTY, to the extent permitted by law.  Type "show copying"
6and "show warranty" for details.
7This GDB was configured as "x86_64-unknown-linux-gnu".
8For bug reporting instructions, please see:
9<http://www.gnu.org/software/gdb/bugs/>.
10[Thread debugging using libthread_db enabled]
11Using host libthread_db library "/lib/libthread_db.so.1".
12To enable execution of this file add
13        add-auto-load-safe-path /home/jdemeyer/local/lib64/libstdc++.so.6.0.18-gdb.py
14line to your configuration file "/home/jdemeyer/.gdbinit".
15To completely disable this security protection add
16        set auto-load safe-path /
17line to your configuration file "/home/jdemeyer/.gdbinit".
18For more information about this security protection see the
19"Auto-loading safe path" section in the GDB manual.  E.g., run from the shell:
20        info "(gdb)Auto-loading safe path"
210x00007fc1f8d7e315 in waitpid () from /lib/libpthread.so.0
22
23Stack backtrace
24---------------
25No symbol table info available.
26#1  0x00007fc1f6d64918 in print_enhanced_backtrace ()
27   from /release/sage-5.7.beta3-doctest/local/lib/libcsage.so
28No symbol table info available.
29#2  0x00007fc1f6d6497e in sigdie ()
30   from /release/sage-5.7.beta3-doctest/local/lib/libcsage.so
31No symbol table info available.
32#3  0x00007fc1f6d64163 in sage_signal_handler ()
33   from /release/sage-5.7.beta3-doctest/local/lib/libcsage.so
34No symbol table info available.
35#4  <signal handler called>
36No symbol table info available.
37#5  0x00007fc1f83b80c5 in raise () from /lib/libc.so.6
38No symbol table info available.
39#6  0x00007fc1f83b9b20 in abort () from /lib/libc.so.6
40No symbol table info available.
41#7  0x00007fc1f83f2ceb in ?? () from /lib/libc.so.6
42No symbol table info available.
43#8  0x00007fc1f83fd235 in ?? () from /lib/libc.so.6
44No symbol table info available.
45#9  0x00007fc1f83fde27 in free () from /lib/libc.so.6
46No symbol table info available.
47#10 0x00007fc1d04ba394 in sage_free (ptr=<optimized out>)
48    at ../../local/include/csage/memory.h:46
49No locals.
50#11 __pyx_pf_4sage_6graphs_17generic_graph_pyx_14SubgraphSearch_12__dealloc__
51    (__pyx_v_self=0x7fc1c67d5b00) at sage/graphs/generic_graph_pyx.c:6396
52        __pyx_v_i = <optimized out>
53        __pyx_t_1 = <optimized out>
54#12 __pyx_pw_4sage_6graphs_17generic_graph_pyx_14SubgraphSearch_13__dealloc__
55    (__pyx_v_self=0x7fc1c67d5b00) at sage/graphs/generic_graph_pyx.c:6362
56No locals.
57#13 __pyx_tp_dealloc_4sage_6graphs_17generic_graph_pyx_SubgraphSearch (
58    o=0x7fc1c67d5b00) at sage/graphs/generic_graph_pyx.c:10376
59        etype = 0x7fc1f934e1e0 <_PyExc_ValueError>
60        eval = 0x7fc1c382dbd8
61        etb = 0x7fc1c382dc20
62        p = 0x7fc1c67d5b00
63#14 0x00007fc1f90459d9 in type_call (type=<optimized out>,
64    args=0x7fc1c5be0200, kwds=0x0) at Objects/typeobject.c:738
65        obj = 0x7fc1c67d5b00
66#15 0x00007fc1f8fdc833 in PyObject_Call (
67    func=func@entry=0x7fc1d06d7ca0 <__pyx_type_4sage_6graphs_17generic_graph_pyx_SubgraphSearch>, arg=arg@entry=0x7fc1c5be0200, kw=kw@entry=0x0)
68    at Objects/abstract.c:2529
69        result = <optimized out>
70        call = 0x7fc1f9045900 <type_call>
71#16 0x00007fc1f908e286 in do_call (nk=<optimized out>, na=2,
72    pp_stack=0x7fffb0018c40,
73    func=0x7fc1d06d7ca0 <__pyx_type_4sage_6graphs_17generic_graph_pyx_SubgraphSearch>) at Python/ceval.c:4239
74        callargs = <optimized out>
75        kwdict = 0x0
76        result = 0x0
77#17 call_function (oparg=<optimized out>, pp_stack=0x7fffb0018c40)
78    at Python/ceval.c:4044
79        func = 0x7fc1d06d7ca0 <__pyx_type_4sage_6graphs_17generic_graph_pyx_SubgraphSearch>
80        w = <optimized out>
81        na = 2
82        nk = <optimized out>
83        n = <optimized out>
84        pfunc = 0x2e4e638
85        x = <optimized out>
86#18 PyEval_EvalFrameEx (f=f@entry=0x2e4e4c0, throwflag=throwflag@entry=0)
87    at Python/ceval.c:2666
88        sp = 0x2e4e640
89        stack_pointer = <optimized out>
90        next_instr = <optimized out>
91        opcode = <optimized out>
92        oparg = <optimized out>
93        why = WHY_NOT
94        err = 0
95        x = <optimized out>
96        v = <optimized out>
97        w = <optimized out>
98        u = <optimized out>
99        t = <optimized out>
100        stream = 0x0
101        fastlocals = 0x2e4e638
102        freevars = <optimized out>
103        retval = <optimized out>
104        tstate = <optimized out>
105        co = <optimized out>
106        instr_ub = -1
107        instr_lb = 0
108        instr_prev = -1
109        first_instr = <optimized out>
110        names = <optimized out>
111        consts = <optimized out>
112#19 0x00007fc1f90929ed in PyEval_EvalCodeEx (co=<optimized out>,
113    globals=<optimized out>, locals=<optimized out>, args=args@entry=0x0,
114    argcount=argcount@entry=0, kws=kws@entry=0x0, kwcount=kwcount@entry=0,
115    defs=defs@entry=0x0, defcount=defcount@entry=0, closure=closure@entry=0x0)
116    at Python/ceval.c:3253
117        f = 0x2e4e4c0
118        retval = 0x0
119        fastlocals = 0x2e4e638
120        freevars = 0x2e4e638
121        tstate = 0x6010a0
122        x = <optimized out>
123        u = <optimized out>
124#20 0x00007fc1f9092b22 in PyEval_EvalCode (co=<optimized out>,
125    globals=<optimized out>, locals=<optimized out>) at Python/ceval.c:667
126No locals.
127#21 0x00007fc1f908a0ce in builtin_eval (self=<optimized out>,
128    args=<optimized out>) at Python/bltinmodule.c:656
129        cmd = 0x7fc1f947c530
130        result = <optimized out>
131        tmp = 0x0
132        globals = 0x640820
133        locals = 0x640820
134        str = 0x7fc1f948cb10 "\001"
135        cf = {cf_flags = -112644268}
136#22 0x00007fc1f90920bb in call_function (oparg=<optimized out>,
137    pp_stack=0x7fffb0018f10) at Python/ceval.c:4021
138        flags = <optimized out>
139        tstate = 0x6010a0
140        func = 0x7fc1f9582200
141        w = <optimized out>
142        na = 1
143        nk = <optimized out>
144        n = <optimized out>
145        pfunc = 0x6ce158
146        x = <optimized out>
147#23 PyEval_EvalFrameEx (f=f@entry=0x6cdfe0, throwflag=throwflag@entry=0)
148    at Python/ceval.c:2666
149        sp = 0x6ce160
150        stack_pointer = <optimized out>
151        next_instr = <optimized out>
152        opcode = <optimized out>
153        oparg = <optimized out>
154        why = WHY_NOT
155        err = 0
156        x = <optimized out>
157        v = <optimized out>
158        w = <optimized out>
159        u = <optimized out>
160        t = <optimized out>
161        stream = 0x0
162        fastlocals = 0x6ce158
163        freevars = <optimized out>
164        retval = <optimized out>
165        tstate = <optimized out>
166        co = <optimized out>
167        instr_ub = -1
168        instr_lb = 0
169        instr_prev = -1
170        first_instr = <optimized out>
171        names = <optimized out>
172        consts = <optimized out>
173#24 0x00007fc1f90929ed in PyEval_EvalCodeEx (co=co@entry=0x7fc1f9566e30,
174    globals=globals@entry=0x640820, locals=locals@entry=0x640820,
175    args=args@entry=0x0, argcount=argcount@entry=0, kws=kws@entry=0x0,
176    kwcount=kwcount@entry=0, defs=defs@entry=0x0, defcount=defcount@entry=0,
177    closure=closure@entry=0x0) at Python/ceval.c:3253
178        f = 0x6cdfe0
179        retval = 0x0
180        fastlocals = 0x6ce158
181        freevars = 0x6ce158
182        tstate = 0x6010a0
183        x = <optimized out>
184        u = <optimized out>
185#25 0x00007fc1f9092b22 in PyEval_EvalCode (co=co@entry=0x7fc1f9566e30,
186    globals=globals@entry=0x640820, locals=locals@entry=0x640820)
187    at Python/ceval.c:667
188No locals.
189#26 0x00007fc1f90bcce2 in run_mod (arena=0x6c6c90, flags=0x7fffb0019130,
190    locals=0x640820, globals=0x640820, filename=<optimized out>,
191    mod=<optimized out>) at Python/pythonrun.c:1353
192        co = 0x7fc1f9566e30
193        v = <optimized out>
194#27 PyRun_FileExFlags (fp=fp@entry=0x6d5090,
195    filename=filename@entry=0x7fffb001a9d2 "/release/sage-5.7.beta3-doctest/local/bin/sage-eval", start=start@entry=257, globals=globals@entry=0x640820,
196    locals=locals@entry=0x640820, closeit=closeit@entry=1,
197    flags=flags@entry=0x7fffb0019130) at Python/pythonrun.c:1339
198        mod = <optimized out>
199        arena = 0x6c6c90
200#28 0x00007fc1f90be217 in PyRun_SimpleFileExFlags (fp=fp@entry=0x6d5090,
201    filename=filename@entry=0x7fffb001a9d2 "/release/sage-5.7.beta3-doctest/local/bin/sage-eval", closeit=closeit@entry=1, flags=flags@entry=0x7fffb0019130)
202    at Python/pythonrun.c:943
203        m = <optimized out>
204        d = 0x640820
205        v = <optimized out>
206        ext = 0x7fffb001aa01 "eval"
207        set_file_name = 1
208        ret = <optimized out>
209        len = <optimized out>
210#29 0x00007fc1f90be6d3 in PyRun_AnyFileExFlags (fp=fp@entry=0x6d5090,
211    filename=filename@entry=0x7fffb001a9d2 "/release/sage-5.7.beta3-doctest/local/bin/sage-eval", closeit=closeit@entry=1, flags=flags@entry=0x7fffb0019130)
212    at Python/pythonrun.c:747
213No locals.
214#30 0x00007fc1f90d3dcb in Py_Main (argc=<optimized out>, argv=<optimized out>)
215    at Modules/main.c:639
216        c = <optimized out>
217        sts = -1
218        command = 0x0
219        filename = 0x7fffb001a9d2 "/release/sage-5.7.beta3-doctest/local/bin/sage-eval"
220        module = 0x0
221        fp = 0x6d5090
222        p = <optimized out>
223        unbuffered = 0
224        skipfirstline = 0
225        stdin_is_interactive = 1
226        help = <optimized out>
227        version = <optimized out>
228        saw_unbuffered_flag = <optimized out>
229        cf = {cf_flags = 0}
230#31 0x00007fc1f83a41f4 in __libc_start_main () from /lib/libc.so.6
231No symbol table info available.
232#32 0x00000000004006d1 in _start ()
233No symbol table info available.
234
235
236Cython backtrace (newest frame = last)
237--------------------------------------
238#0  0x00000000004006a8 in _start()
239#1  0x00007fc1f83a4100 in __libc_start_main()
240#2  0x00007fc1f90d31a0 in Py_Main()
241#3  0x00007fc1f90be660 in PyRun_AnyFileExFlags()
242#4  0x00007fc1f90be150 in PyRun_SimpleFileExFlags()
243#5  0x00007fc1f90bcc50 in PyRun_FileExFlags()
244#6  0x00007fc1f90bccb9 in run_mod()
245#7  0x00007fc1f9092af0 in PyEval_EvalCode()
246#8  0x00007fc1f90921d0 in PyEval_EvalCodeEx()
247#9  0x00007fc1f908c940 in <module>() at /release/sage-5.7.beta3-doctest/local/bin/sage-eval:13
248     8    if len(sys.argv) > 1:
249     9        s = preparse(" ".join(sys.argv[1:]))
250    10        if s.startswith('load') or s.startswith('attach'):
251    11            os.system('sage "' + os.path.join(os.getcwd(), s.split(None, 1)[1]) + '"')
252    12        else:
253>   13            eval(compile(s,'<cmdline>','exec'))
254    14   
255#10 0x00007fc1f908e197 in call_function()
256#11 0x00007fc1f9089ef0 in builtin_eval()
257#12 0x00007fc1f9092af0 in PyEval_EvalCode()
258#13 0x00007fc1f90921d0 in PyEval_EvalCodeEx()
259#14 0x00007fc1f908c940 in <module>() at <cmdline>:1
260#15 0x00007fc1f908e197 in call_function()
261#16 0x00007fc1f908e1f4 in do_call()
262#17 0x00007fc1f8fdc7f0 in PyObject_Call()
263#18 0x00007fc1f9045900 in type_call()
264#19 0x00007fc1d04ba330 in __pyx_tp_dealloc_4sage_6graphs_17generic_graph_pyx_SubgraphSearch() at /release/merger/sage-5.7.beta3/devel/sage-main/sage/graphs/generic_graph_pyx.c:10376
265  10371      PyObject_GC_UnTrack(o);
266  10372      {
267  10373        PyObject *etype, *eval, *etb;
268  10374        PyErr_Fetch(&etype, &eval, &etb);
269  10375        ++Py_REFCNT(o);
270> 10376        __pyx_pw_4sage_6graphs_17generic_graph_pyx_14SubgraphSearch_13__dealloc__(o);
271  10377        if (PyErr_Occurred()) PyErr_WriteUnraisable(o);
272  10378        --Py_REFCNT(o);
273  10379        PyErr_Restore(etype, eval, etb);
274  10380      }
275#20 0x00007fc1d04ba359 in __dealloc__() at /release/merger/sage-5.7.beta3/devel/sage-main/sage/graphs/generic_graph_pyx.pyx:778
276   773                        self.busy[self.stack[self.active]] = 0
277   774                    self.stack[self.active] = -1
278   775                    self.active -= 1
279   776   
280   777            sig_off()
281>  778            raise StopIteration
282   779   
283   780        def __dealloc__(self):
284   781            r"""
285   782            Freeing the allocated memory.
286#21 0x00007fc1d04ba359 in __pyx_pf_4sage_6graphs_17generic_graph_pyx_14SubgraphSearch_12__dealloc__() at /release/merger/sage-5.7.beta3/devel/sage-main/sage/graphs/generic_graph_pyx.c:6396
287  6391     *         sage_free(self.busy)
288  6392     *         sage_free(self.stack)             # <<<<<<<<<<<<<<
289  6393     *         sage_free(self.vertices)
290  6394     *         for 0 <= i < self.nh:
291  6395     */
292> 6396      sage_free(__pyx_v_self->stack);
293  6397   
294  6398      /* "sage/graphs/generic_graph_pyx.pyx":788
295  6399     *         sage_free(self.busy)
296  6400     *         sage_free(self.stack)
297#22 0x00007fc1d04ba388 in sage_free() at /release/merger/sage-5.7.beta3/devel/sage-main/c_lib/include/memory.h:46
298    41        return ret;
299    42    }
300    43    static inline void sage_free(void* ptr)
301    44    {
302    45        sig_block();
303>   46        free(ptr);
304    47        sig_unblock();
305    48    }
306    49    static inline void* sage_realloc(void *ptr, size_t size)
307    50    {
308#23 0x00007fc1f0c365f0 in free()
309Exception:  <type 'exceptions.TypeError'> must be string, not None
310
311
312warning: File "/home/jdemeyer/local/lib64/libstdc++.so.6.0.18-gdb.py" auto-loading has been declined by your `auto-load safe-path' set to "$debugdir:$datadir/auto-load".